PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
oxytropis_ochrocephala_EVM0026669.1 oxytropis_ochrocephala oxytropis_ochrocephala_EVM0026669.1
oxytropis_ochrocephala_EVM0030056.1 oxytropis_ochrocephala oxytropis_ochrocephala_EVM0030056.1
oxytropis_ochrocephala_EVM0030775.1 oxytropis_ochrocephala oxytropis_ochrocephala_EVM0030775.1
paeonia_ostii_Pos.gene16168.mRNA-1 paeonia_ostii paeonia_ostii_Pos.gene16168.mRNA-1
paeonia_ostii_Pos.gene29111.mRNA-1 paeonia_ostii paeonia_ostii_Pos.gene29111.mRNA-1
paeonia_ostii_Pos.gene61558.mRNA-1 paeonia_ostii paeonia_ostii_Pos.gene61558.mRNA-1
Pambctg003230_pilon_pilon_pilon0046590 pallavicinia_ambigua Pambctg003230_pilon_pilon_pilon0046590
Pambctg003320_pilon_pilon_pilon0048010 pallavicinia_ambigua Pambctg003320_pilon_pilon_pilon0048010
Pambctg003320_pilon_pilon_pilon0048340 pallavicinia_ambigua Pambctg003320_pilon_pilon_pilon0048340
Pambctg005610_pilon_pilon_pilon0078720 pallavicinia_ambigua Pambctg005610_pilon_pilon_pilon0078720
Pambctg009050_pilon_pilon_pilon0125530 pallavicinia_ambigua Pambctg009050_pilon_pilon_pilon0125530
Pambctg009320_pilon_pilon_pilon0140070 pallavicinia_ambigua Pambctg009320_pilon_pilon_pilon0140070
Pambctg011290_pilon_pilon_pilon0170430 pallavicinia_ambigua Pambctg011290_pilon_pilon_pilon0170430
Pambctg012880_pilon_pilon_pilon0196280 pallavicinia_ambigua Pambctg012880_pilon_pilon_pilon0196280
Pambctg013230_pilon_pilon_pilon0202160 pallavicinia_ambigua Pambctg013230_pilon_pilon_pilon0202160
Pambctg015180_pilon_pilon_pilon0242310 pallavicinia_ambigua Pambctg015180_pilon_pilon_pilon0242310
Pambctg015420_pilon_pilon_pilon0247350 pallavicinia_ambigua Pambctg015420_pilon_pilon_pilon0247350
Pambctg015990_pilon_pilon_pilon0262480 pallavicinia_ambigua Pambctg015990_pilon_pilon_pilon0262480
Pambctg016040_pilon_pilon_pilon0270310 pallavicinia_ambigua Pambctg016040_pilon_pilon_pilon0270310
Pg_S0024.2 panax_ginseng Pg_S0024.2
Pg_S0085.45 panax_ginseng Pg_S0085.45
Pg_S0247.35 panax_ginseng Pg_S0247.35
Pg_S0247.36 panax_ginseng Pg_S0247.36
Pg_S0406.8 panax_ginseng Pg_S0406.8
Pg_S0428.19 panax_ginseng Pg_S0428.19
Pg_S0428.47 panax_ginseng Pg_S0428.47
Pg_S0528.1 panax_ginseng Pg_S0528.1
Pg_S0954.1 panax_ginseng Pg_S0954.1
Pg_S1135.17 panax_ginseng Pg_S1135.17
Pg_S1157.28 panax_ginseng Pg_S1157.28