PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Paphscaffold700246290.1 phalaenopsis_aphrodite Paphscaffold700246290.1
PequScaffold0000020019420 phalaenopsis_equestris PequScaffold0000020019420
PequScaffold0006420228180 phalaenopsis_equestris PequScaffold0006420228180
PequScaffold0007270236260 phalaenopsis_equestris PequScaffold0007270236260
PequScaffold0007650245260 phalaenopsis_equestris PequScaffold0007650245260
Pacu01G0018130.1 phaseolus_acutifolius Pacu01G0018130.1
Pacu01G0018140.1 phaseolus_acutifolius Pacu01G0018140.1
Pacu07G0009680.1 phaseolus_acutifolius Pacu07G0009680.1
Pacu07G0009710.1 phaseolus_acutifolius Pacu07G0009710.1
Pacu07G0015530.1 phaseolus_acutifolius Pacu07G0015530.1
Pacu08G0029440.1 phaseolus_acutifolius Pacu08G0029440.1
Plun01G0032610.1 phaseolus_lunatus Plun01G0032610.1
Plun01G0032610.10 phaseolus_lunatus Plun01G0032610.10
Plun01G0032610.11 phaseolus_lunatus Plun01G0032610.11
Plun01G0032610.12 phaseolus_lunatus Plun01G0032610.12
Plun01G0032610.13 phaseolus_lunatus Plun01G0032610.13
Plun01G0032610.2 phaseolus_lunatus Plun01G0032610.2
Plun01G0032610.3 phaseolus_lunatus Plun01G0032610.3
Plun01G0032610.4 phaseolus_lunatus Plun01G0032610.4
Plun01G0032610.5 phaseolus_lunatus Plun01G0032610.5
Plun01G0032610.6 phaseolus_lunatus Plun01G0032610.6
Plun01G0032610.7 phaseolus_lunatus Plun01G0032610.7
Plun01G0032610.8 phaseolus_lunatus Plun01G0032610.8
Plun01G0032610.9 phaseolus_lunatus Plun01G0032610.9
Plun07G0010730.1 phaseolus_lunatus Plun07G0010730.1
Plun07G0010740.1 phaseolus_lunatus Plun07G0010740.1
Plun07G0010750.1 phaseolus_lunatus Plun07G0010750.1
Plun07G0010760.1 phaseolus_lunatus Plun07G0010760.1
Plun07G0010770.1 phaseolus_lunatus Plun07G0010770.1
Plun07G0010780.1 phaseolus_lunatus Plun07G0010780.1