PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
arabis_nemorensis_VVA97099.1 arabis_nemorensis arabis_nemorensis_VVA97099.1
arabis_nemorensis_VVB02432.1 arabis_nemorensis arabis_nemorensis_VVB02432.1
arabis_nemorensis_VVB13156.1 arabis_nemorensis arabis_nemorensis_VVB13156.1
Adur02G0031790 arachis_duranensis Adur02G0031790
Adur05G0038550 arachis_duranensis Adur05G0038550
Adur06G0009900 arachis_duranensis Adur06G0009900
Adur06G0016440 arachis_duranensis Adur06G0016440
Adur07G0000590 arachis_duranensis Adur07G0000590
Adur08G0015670 arachis_duranensis Adur08G0015670
Adur08G0029750 arachis_duranensis Adur08G0029750
Adur09G0035990 arachis_duranensis Adur09G0035990
ARhyp02G0027740.1 arachis_hypogaea ARhyp02G0027740.1
ARhyp06G0014910.1 arachis_hypogaea ARhyp06G0014910.1
ARhyp08G0013140.1 arachis_hypogaea ARhyp08G0013140.1
ARhyp09G0031120.1 arachis_hypogaea ARhyp09G0031120.1
ARhyp12G0031200.1 arachis_hypogaea ARhyp12G0031200.1
ARhyp14G0015080.1 arachis_hypogaea ARhyp14G0015080.1
ARhyp16G0016050.1 arachis_hypogaea ARhyp16G0016050.1
ARhyp17G0000360.1 arachis_hypogaea ARhyp17G0000360.1
ARhyp17G0000910.1 arachis_hypogaea ARhyp17G0000910.1
ARhyp18G0004950.1 arachis_hypogaea ARhyp18G0004950.1
ARhyp18G0015690.1 arachis_hypogaea ARhyp18G0015690.1
ARhyp19G0027380.1 arachis_hypogaea ARhyp19G0027380.1
ARhyp20G0019970.1 arachis_hypogaea ARhyp20G0019970.1
Aipa02G0034750 arachis_ipaensis Aipa02G0034750
Aipa05G0002200 arachis_ipaensis Aipa05G0002200
Aipa05G0018000 arachis_ipaensis Aipa05G0018000
Aipa06G0012250 arachis_ipaensis Aipa06G0012250
Aipa07G0000420 arachis_ipaensis Aipa07G0000420
Aipa08G0004370 arachis_ipaensis Aipa08G0004370