PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Aturscaffold_10024010 aulacomnium_turgidum Aturscaffold_10024010
Aturscaffold_20078020 aulacomnium_turgidum Aturscaffold_20078020
Aturscaffold_20079190 aulacomnium_turgidum Aturscaffold_20079190
Aturscaffold_40134620 aulacomnium_turgidum Aturscaffold_40134620
Aturscaffold_40134640 aulacomnium_turgidum Aturscaffold_40134640
Aturscaffold_50180280 aulacomnium_turgidum Aturscaffold_50180280
Aturscaffold_50180290 aulacomnium_turgidum Aturscaffold_50180290
Aturscaffold_50180320 aulacomnium_turgidum Aturscaffold_50180320
Aturscaffold_50180350 aulacomnium_turgidum Aturscaffold_50180350
Aturscaffold_60217940 aulacomnium_turgidum Aturscaffold_60217940
Aturscaffold_80284210 aulacomnium_turgidum Aturscaffold_80284210
Aturscaffold_90314010 aulacomnium_turgidum Aturscaffold_90314010
Aturscaffold_90315750 aulacomnium_turgidum Aturscaffold_90315750
Aturscaffold_90315790 aulacomnium_turgidum Aturscaffold_90315790
Aturscaffold_90316450 aulacomnium_turgidum Aturscaffold_90316450
Aturscaffold_90318790 aulacomnium_turgidum Aturscaffold_90318790
Aprocontig_KL6621540051580.1 auxenochlorella_protothecoides Aprocontig_KL6621540051580.1
AatlScoFOjO_1310_17880011500.1 avena_atlantica AatlScoFOjO_1310_17880011500.1
AatlScoFOjO_1310_17880011510.1 avena_atlantica AatlScoFOjO_1310_17880011510.1
AatlScoFOjO_1310_17880011520.1 avena_atlantica AatlScoFOjO_1310_17880011520.1
AatlScoFOjO_1310_17880019540.1 avena_atlantica AatlScoFOjO_1310_17880019540.1
AatlScoFOjO_1310_17880019550.1 avena_atlantica AatlScoFOjO_1310_17880019550.1
AatlScoFOjO_1310_17880019570.1 avena_atlantica AatlScoFOjO_1310_17880019570.1
AatlScoFOjO_1310_17880019580.1 avena_atlantica AatlScoFOjO_1310_17880019580.1
AatlScoFOjO_1310_17880019590.1 avena_atlantica AatlScoFOjO_1310_17880019590.1
AatlScoFOjO_1702_23380074670.1 avena_atlantica AatlScoFOjO_1702_23380074670.1
AatlScoFOjO_1760_23990149930.1 avena_atlantica AatlScoFOjO_1760_23990149930.1
AatlScoFOjO_1760_23990163350.1 avena_atlantica AatlScoFOjO_1760_23990163350.1
AatlScoFOjO_1760_23990174730.1 avena_atlantica AatlScoFOjO_1760_23990174730.1
AatlScoFOjO_1760_23990178490.1 avena_atlantica AatlScoFOjO_1760_23990178490.1