Auxenochlorella protothecoides (auxenochlorella_protothecoides)
Imported from atlas release summary for Auxenochlorella protothecoides.
97
Candidate Genes
78
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
97
Candidate Genes
4CL
9.28%
BAHD
7.22%
NMT
5.5%
POD
5.15%
STR
4.12%
IFR
4.12%
CYP71
4.12%
C4H
3.44%
Other Families
57.04%
More Families (70)
C3'H/CYP98A
10
3.44%
GS
9
3.09%
TRI/TRII
7
2.41%
IFS
6
2.06%
CAS
6
2.06%
MVK
6
2.06%
CNMT
5
1.72%
CPR
5
1.72%
SMT1/SMT2/SMT3
5
1.72%
CYP76
5
1.72%
DWF4/CYP90B1
4
1.37%
BR6OX2/CYP85A2
4
1.37%
7DLGT
3
1.03%
PYKS
3
1.03%
7DLH
3
1.03%
T3O
3
1.03%
FNS
3
1.03%
PAL
3
1.03%
CSE
3
1.03%
SQS/FDFT1
3
1.03%
UGT
3
1.03%
AACT
3
1.03%
SLS
2
0.69%
COR
2
0.69%
MPO
2
0.69%
T16H
2
0.69%
UFGT
2
0.69%
CCR
2
0.69%
CAD
2
0.69%
TAT
2
0.69%
DWF7
2
0.69%
DET2
2
0.69%
CYP51G1
2
0.69%
SQE
2
0.69%
SMO1/SMO2
2
0.69%
FPPS
2
0.69%
HDS/IspG
2
0.69%
GGPPS
2
0.69%
IO
1
0.34%
SGD
1
0.34%
ODC
1
0.34%
ADC
1
0.34%
8HGO
1
0.34%
16OMT
1
0.34%
PMT
1
0.34%
TYDC_DDC
1
0.34%
TDC
1
0.34%
NCS
1
0.34%
CHS
1
0.34%
ANR
1
0.34%
F3'H/CYP75B
1
0.34%
DFR
1
0.34%
F3H
1
0.34%
CCoAOMT
1
0.34%
COMT
1
0.34%
HPPR
1
0.34%
FK
1
0.34%
CYP90D1
1
0.34%
HYD1
1
0.34%
DWF5
1
0.34%
DWF1
1
0.34%
CPI1
1
0.34%
MDS/IspF
1
0.34%
DXS
1
0.34%
IDI
1
0.34%
TPS
1
0.34%
HMGS
1
0.34%
HDR/IspH
1
0.34%
MCT/IspD
1
0.34%
CMK/IspE
1
0.34%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 34 | 12 | BAHD (17) | View species results |
| Alkaloid pathway | 19 | 7 | NMT (6) | View species results |
| Steroid pathway | 16 | 8 | CAS (6) | View species results |
| Phenylpropanoid pathway | 13 | 4 | POD (8) | View species results |
| Rosmarinic acid pathway | 10 | 4 | CPR (5) | View species results |
| Flavonoid pathway | 5 | 2 | 4CL (3) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 15 | 66 | 7DLH, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CYP51G1, CYP71, CYP76, CYP90D1, DWF4/CYP90B1, F3'H/CYP75B, IFS, IO, SLS, T16H, T3O |
| BAHD/acyltransferase | 1 | 21 | BAHD |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Aprocontig_KL6621540050780.1 | Alkaloid | 16OMT | low | borderline |
| Aprocontig_KL6620810002320.1 | Alkaloid | 7DLGT | low | borderline |
| Aprocontig_KL6620900008710.1 | Alkaloid | 7DLGT | low | borderline |
| Aprocontig_KL6621250034010.1 | Alkaloid | 7DLGT | low | borderline |
| Aprocontig_KL6621120025930.1 | Alkaloid | 7DLH | low | borderline |
| Aprocontig_KL6621300041300.1 | Alkaloid | 7DLH | medium | borderline |
| Aprocontig_KL6621490050000.1 | Alkaloid | 7DLH | medium | borderline |
| Aprocontig_KL6621300040990.1 | Alkaloid | 8HGO | medium | borderline |
| Aprocontig_KL6621220031130.1 | Alkaloid | ADC | medium | pass |
| Aprocontig_KL6620900008440.1 | Alkaloid | CNMT | low | borderline |
| Aprocontig_KL6620940009700.1 | Alkaloid | CNMT | low | borderline |
| Aprocontig_KL6621120026260.1 | Alkaloid | CNMT | low | borderline |
| Aprocontig_KL6621330041910.1 | Alkaloid | CNMT | low | borderline |
| Aprocontig_KL6621350042080.1 | Alkaloid | CNMT | low | borderline |
| Aprocontig_KL6621140027460.1 | Alkaloid | COR | medium | pass |
| Aprocontig_KL6621890066890.1 | Alkaloid | COR | low | borderline |
| Aprocontig_KL6621070017600.1 | Alkaloid | GS | low | borderline |
| Aprocontig_KL6621270037490.1 | Alkaloid | GS | medium | pass |
| Aprocontig_KL6621270038360.1 | Alkaloid | GS | low | borderline |
| Aprocontig_KL6621290039360.1 | Alkaloid | GS | low | borderline |
| Aprocontig_KL6621660056920.1 | Alkaloid | GS | high | pass |
| Aprocontig_KL6621750060690.1 | Alkaloid | GS | medium | pass |
| Aprocontig_KL6621830062830.1 | Alkaloid | GS | low | borderline |
| Aprocontig_KL6621900067820.1 | Alkaloid | GS | low | borderline |
| Aprocontig_KL6621900067830.1 | Alkaloid | GS | low | borderline |
| Aprocontig_KL6621010012840.1 | Alkaloid | IO | low | borderline |
| Aprocontig_KL6621190029970.1 | Alkaloid | MPO | low | borderline |
| Aprocontig_KL6621680058570.1 | Alkaloid | MPO | medium | pass |
| Aprocontig_KL6621870065550.1 | Alkaloid | NCS | medium | borderline |
| Aprocontig_KL6620820003140.1 | Alkaloid | NMT | medium | pass |
| Aprocontig_KL6620900008400.1 | Alkaloid | NMT | medium | borderline |
| Aprocontig_KL6620940009530.1 | Alkaloid | NMT | low | borderline |
| Aprocontig_KL6621010013390.1 | Alkaloid | NMT | low | borderline |
| Aprocontig_KL6621050015320.1 | Alkaloid | NMT | low | borderline |
| Aprocontig_KL6621110024670.1 | Alkaloid | NMT | low | borderline |
| Aprocontig_KL6621140027030.1 | Alkaloid | NMT | medium | pass |
| Aprocontig_KL6621160028330.1 | Alkaloid | NMT | medium | borderline |
| Aprocontig_KL6621250034420.1 | Alkaloid | NMT | medium | pass |
| Aprocontig_KL6621410044620.1 | Alkaloid | NMT | medium | borderline |
| Aprocontig_KL6621460049020.1 | Alkaloid | NMT | medium | pass |
| Aprocontig_KL6621540051020.1 | Alkaloid | NMT | medium | pass |
| Aprocontig_KL6621650056250.1 | Alkaloid | NMT | medium | pass |
| Aprocontig_KL6621650056800.1 | Alkaloid | NMT | low | borderline |
| Aprocontig_KL6621800061090.1 | Alkaloid | NMT | low | borderline |
| Aprocontig_KL6621890067000.1 | Alkaloid | NMT | low | borderline |
| Aprocontig_KL6621070019040.1 | Alkaloid | ODC | low | borderline |
| Aprocontig_KL6621540051540.1 | Alkaloid | PMT | medium | borderline |
| Aprocontig_KL6621090021060.1 | Alkaloid | PYKS | low | borderline |
| Aprocontig_KL6621380044180.1 | Alkaloid | PYKS | low | borderline |
| Aprocontig_KL6621410044820.1 | Alkaloid | PYKS | low | borderline |