PlantSME Plant secondary metabolism enzyme database

Auxenochlorella protothecoides (auxenochlorella_protothecoides)

Imported from atlas release summary for Auxenochlorella protothecoides.

97
Candidate Genes
78
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 35.05% Alkaloid pathway 19.59% Steroid pathway 16.49% Phenylpropanoid pathway 13.4% Rosmarinic acid pathway 10.31% Flavonoid pathway 5.15%
Family Distribution
4CL 9.28% BAHD 7.22% NMT 5.5% POD 5.15% STR 4.12% IFR 4.12% CYP71 4.12% C4H 3.44%
Other Families 57.04%
More Families (70)
C3'H/CYP98A 10 3.44% GS 9 3.09% TRI/TRII 7 2.41% IFS 6 2.06% CAS 6 2.06% MVK 6 2.06% CNMT 5 1.72% CPR 5 1.72% SMT1/SMT2/SMT3 5 1.72% CYP76 5 1.72% DWF4/CYP90B1 4 1.37% BR6OX2/CYP85A2 4 1.37% 7DLGT 3 1.03% PYKS 3 1.03% 7DLH 3 1.03% T3O 3 1.03% FNS 3 1.03% PAL 3 1.03% CSE 3 1.03% SQS/FDFT1 3 1.03% UGT 3 1.03% AACT 3 1.03% SLS 2 0.69% COR 2 0.69% MPO 2 0.69% T16H 2 0.69% UFGT 2 0.69% CCR 2 0.69% CAD 2 0.69% TAT 2 0.69% DWF7 2 0.69% DET2 2 0.69% CYP51G1 2 0.69% SQE 2 0.69% SMO1/SMO2 2 0.69% FPPS 2 0.69% HDS/IspG 2 0.69% GGPPS 2 0.69% IO 1 0.34% SGD 1 0.34% ODC 1 0.34% ADC 1 0.34% 8HGO 1 0.34% 16OMT 1 0.34% PMT 1 0.34% TYDC_DDC 1 0.34% TDC 1 0.34% NCS 1 0.34% CHS 1 0.34% ANR 1 0.34% F3'H/CYP75B 1 0.34% DFR 1 0.34% F3H 1 0.34% CCoAOMT 1 0.34% COMT 1 0.34% HPPR 1 0.34% FK 1 0.34% CYP90D1 1 0.34% HYD1 1 0.34% DWF5 1 0.34% DWF1 1 0.34% CPI1 1 0.34% MDS/IspF 1 0.34% DXS 1 0.34% IDI 1 0.34% TPS 1 0.34% HMGS 1 0.34% HDR/IspH 1 0.34% MCT/IspD 1 0.34% CMK/IspE 1 0.34%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 34 12 BAHD (17) View species results
Alkaloid pathway 19 7 NMT (6) View species results
Steroid pathway 16 8 CAS (6) View species results
Phenylpropanoid pathway 13 4 POD (8) View species results
Rosmarinic acid pathway 10 4 CPR (5) View species results
Flavonoid pathway 5 2 4CL (3) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 15 66 7DLH, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CYP51G1, CYP71, CYP76, CYP90D1, DWF4/CYP90B1, F3'H/CYP75B, IFS, IO, SLS, T16H, T3O
BAHD/acyltransferase 1 21 BAHD
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status
Aprocontig_KL6620950010500.1 Alkaloid TRI/TRII low borderline
Aprocontig_KL6621050015710.1 Alkaloid TRI/TRII medium pass
Aprocontig_KL6621070019480.1 Alkaloid TRI/TRII medium pass
Aprocontig_KL6621110025230.1 Alkaloid TRI/TRII low borderline
Aprocontig_KL6621270036450.1 Alkaloid TRI/TRII medium pass
Aprocontig_KL6621270037250.1 Alkaloid TRI/TRII low borderline
Aprocontig_KL6621460048690.1 Alkaloid TRI/TRII medium pass