Auxenochlorella protothecoides (auxenochlorella_protothecoides)
Imported from atlas release summary for Auxenochlorella protothecoides.
97
Candidate Genes
78
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
97
Candidate Genes
4CL
9.28%
BAHD
7.22%
NMT
5.5%
POD
5.15%
STR
4.12%
IFR
4.12%
CYP71
4.12%
C4H
3.44%
Other Families
57.04%
More Families (70)
C3'H/CYP98A
10
3.44%
GS
9
3.09%
TRI/TRII
7
2.41%
IFS
6
2.06%
CAS
6
2.06%
MVK
6
2.06%
CNMT
5
1.72%
CPR
5
1.72%
SMT1/SMT2/SMT3
5
1.72%
CYP76
5
1.72%
DWF4/CYP90B1
4
1.37%
BR6OX2/CYP85A2
4
1.37%
7DLGT
3
1.03%
PYKS
3
1.03%
7DLH
3
1.03%
T3O
3
1.03%
FNS
3
1.03%
PAL
3
1.03%
CSE
3
1.03%
SQS/FDFT1
3
1.03%
UGT
3
1.03%
AACT
3
1.03%
SLS
2
0.69%
COR
2
0.69%
MPO
2
0.69%
T16H
2
0.69%
UFGT
2
0.69%
CCR
2
0.69%
CAD
2
0.69%
TAT
2
0.69%
DWF7
2
0.69%
DET2
2
0.69%
CYP51G1
2
0.69%
SQE
2
0.69%
SMO1/SMO2
2
0.69%
FPPS
2
0.69%
HDS/IspG
2
0.69%
GGPPS
2
0.69%
IO
1
0.34%
SGD
1
0.34%
ODC
1
0.34%
ADC
1
0.34%
8HGO
1
0.34%
16OMT
1
0.34%
PMT
1
0.34%
TYDC_DDC
1
0.34%
TDC
1
0.34%
NCS
1
0.34%
CHS
1
0.34%
ANR
1
0.34%
F3'H/CYP75B
1
0.34%
DFR
1
0.34%
F3H
1
0.34%
CCoAOMT
1
0.34%
COMT
1
0.34%
HPPR
1
0.34%
FK
1
0.34%
CYP90D1
1
0.34%
HYD1
1
0.34%
DWF5
1
0.34%
DWF1
1
0.34%
CPI1
1
0.34%
MDS/IspF
1
0.34%
DXS
1
0.34%
IDI
1
0.34%
TPS
1
0.34%
HMGS
1
0.34%
HDR/IspH
1
0.34%
MCT/IspD
1
0.34%
CMK/IspE
1
0.34%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 34 | 12 | BAHD (17) | View species results |
| Alkaloid pathway | 19 | 7 | NMT (6) | View species results |
| Steroid pathway | 16 | 8 | CAS (6) | View species results |
| Phenylpropanoid pathway | 13 | 4 | POD (8) | View species results |
| Rosmarinic acid pathway | 10 | 4 | CPR (5) | View species results |
| Flavonoid pathway | 5 | 2 | 4CL (3) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 15 | 66 | 7DLH, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CYP51G1, CYP71, CYP76, CYP90D1, DWF4/CYP90B1, F3'H/CYP75B, IFS, IO, SLS, T16H, T3O |
| BAHD/acyltransferase | 1 | 21 | BAHD |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Aprocontig_KL6620890006430.1 | Flavonoid | 4CL | low | borderline | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Aprocontig_KL6621090020450.1 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Aprocontig_KL6621110025750.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Aprocontig_KL6621110025760.1 | Flavonoid | 4CL | medium | pass | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| Aprocontig_KL6621170028360.1 | Flavonoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Aprocontig_KL6621230033180.1 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Aprocontig_KL6621240033470.1 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Aprocontig_KL6621390044360.1 | Flavonoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Aprocontig_KL6621830062830.1 | Flavonoid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Aprocontig_KL6620890006430.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Aprocontig_KL6621090020450.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Aprocontig_KL6621110025750.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Aprocontig_KL6621110025760.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| Aprocontig_KL6621170028360.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Aprocontig_KL6621230033180.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Aprocontig_KL6621240033470.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Aprocontig_KL6621390044360.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Aprocontig_KL6621830062830.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Aprocontig_KL6620890006430.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Aprocontig_KL6621090020450.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Aprocontig_KL6621110025750.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Aprocontig_KL6621110025760.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| Aprocontig_KL6621170028360.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Aprocontig_KL6621230033180.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Aprocontig_KL6621240033470.1 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Aprocontig_KL6621390044360.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Aprocontig_KL6621830062830.1 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00001__sp_I3PB36_CNL_PETHY |