PlantSME Plant secondary metabolism enzyme database

Auxenochlorella protothecoides (auxenochlorella_protothecoides)

Imported from atlas release summary for Auxenochlorella protothecoides.

97
Candidate Genes
78
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 35.05% Alkaloid pathway 19.59% Steroid pathway 16.49% Phenylpropanoid pathway 13.4% Rosmarinic acid pathway 10.31% Flavonoid pathway 5.15%
Family Distribution
4CL 9.28% BAHD 7.22% NMT 5.5% POD 5.15% STR 4.12% IFR 4.12% CYP71 4.12% C4H 3.44%
Other Families 57.04%
More Families (70)
C3'H/CYP98A 10 3.44% GS 9 3.09% TRI/TRII 7 2.41% IFS 6 2.06% CAS 6 2.06% MVK 6 2.06% CNMT 5 1.72% CPR 5 1.72% SMT1/SMT2/SMT3 5 1.72% CYP76 5 1.72% DWF4/CYP90B1 4 1.37% BR6OX2/CYP85A2 4 1.37% 7DLGT 3 1.03% PYKS 3 1.03% 7DLH 3 1.03% T3O 3 1.03% FNS 3 1.03% PAL 3 1.03% CSE 3 1.03% SQS/FDFT1 3 1.03% UGT 3 1.03% AACT 3 1.03% SLS 2 0.69% COR 2 0.69% MPO 2 0.69% T16H 2 0.69% UFGT 2 0.69% CCR 2 0.69% CAD 2 0.69% TAT 2 0.69% DWF7 2 0.69% DET2 2 0.69% CYP51G1 2 0.69% SQE 2 0.69% SMO1/SMO2 2 0.69% FPPS 2 0.69% HDS/IspG 2 0.69% GGPPS 2 0.69% IO 1 0.34% SGD 1 0.34% ODC 1 0.34% ADC 1 0.34% 8HGO 1 0.34% 16OMT 1 0.34% PMT 1 0.34% TYDC_DDC 1 0.34% TDC 1 0.34% NCS 1 0.34% CHS 1 0.34% ANR 1 0.34% F3'H/CYP75B 1 0.34% DFR 1 0.34% F3H 1 0.34% CCoAOMT 1 0.34% COMT 1 0.34% HPPR 1 0.34% FK 1 0.34% CYP90D1 1 0.34% HYD1 1 0.34% DWF5 1 0.34% DWF1 1 0.34% CPI1 1 0.34% MDS/IspF 1 0.34% DXS 1 0.34% IDI 1 0.34% TPS 1 0.34% HMGS 1 0.34% HDR/IspH 1 0.34% MCT/IspD 1 0.34% CMK/IspE 1 0.34%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 34 12 BAHD (17) View species results
Alkaloid pathway 19 7 NMT (6) View species results
Steroid pathway 16 8 CAS (6) View species results
Phenylpropanoid pathway 13 4 POD (8) View species results
Rosmarinic acid pathway 10 4 CPR (5) View species results
Flavonoid pathway 5 2 4CL (3) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 15 66 7DLH, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CYP51G1, CYP71, CYP76, CYP90D1, DWF4/CYP90B1, F3'H/CYP75B, IFS, IO, SLS, T16H, T3O
BAHD/acyltransferase 1 21 BAHD
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Gene Pathway Family Confidence Status Best Target
Aprocontig_KL6620840003860.1 Phenylpropanoid POD low borderline POD__00016__sp_Q6QPJ6_PRXQ_POPJC
Aprocontig_KL6620890006470.1 Phenylpropanoid POD medium pass POD__00026__sp_Q9XEX2_PRX2B_ARATH
Aprocontig_KL6621010013620.1 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
Aprocontig_KL6621040014950.1 Phenylpropanoid POD low borderline POD__00024__sp_Q9SCX8_PPA17_ARATH
Aprocontig_KL6621090020250.1 Phenylpropanoid POD low borderline POD__00028__sp_Q9ZVD5_AGO4_ARATH
Aprocontig_KL6621110024930.1 Phenylpropanoid POD low borderline POD__00006__sp_O22850_GPX3_ARATH
Aprocontig_KL6621150027890.1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Aprocontig_KL6621280038980.1 Phenylpropanoid POD medium pass POD__00016__sp_Q6QPJ6_PRXQ_POPJC
Aprocontig_KL6621290040780.1 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
Aprocontig_KL6621350042870.1 Phenylpropanoid POD medium pass POD__00011__sp_Q05431_APX1_ARATH
Aprocontig_KL6621430045790.1 Phenylpropanoid POD low borderline POD__00019__sp_Q949Y3_PPA26_ARATH
Aprocontig_KL6621430045800.1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Aprocontig_KL6621430045810.1 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
Aprocontig_KL6621730059990.1 Phenylpropanoid POD low borderline POD__00016__sp_Q6QPJ6_PRXQ_POPJC
Aprocontig_KL6621860065370.1 Phenylpropanoid POD low borderline POD__00019__sp_Q949Y3_PPA26_ARATH