PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
camellia_oleifera_maker-HiC_scaffold_13-snap-gene-1082.14-mRNA-1 camellia_oleifera camellia_oleifera_maker-HiC_scaffold_13-snap-gene-1082.14-mRNA-1
camellia_oleifera_maker-HiC_scaffold_3-snap-gene-1665.40-mRNA-1 camellia_oleifera camellia_oleifera_maker-HiC_scaffold_3-snap-gene-1665.40-mRNA-1
camellia_oleifera_maker-HiC_scaffold_5-snap-gene-1551.0-mRNA-1 camellia_oleifera camellia_oleifera_maker-HiC_scaffold_5-snap-gene-1551.0-mRNA-1
camellia_oleifera_maker-HiC_scaffold_6-snap-gene-767.0-mRNA-1 camellia_oleifera camellia_oleifera_maker-HiC_scaffold_6-snap-gene-767.0-mRNA-1
camellia_oleifera_snap_masked-HiC_scaffold_10-processed-gene-216.61-mRNA-1 camellia_oleifera camellia_oleifera_snap_masked-HiC_scaffold_10-processed-gene-216.61-mRNA-1
camellia_oleifera_snap_masked-HiC_scaffold_12-processed-gene-158.18-mRNA-1 camellia_oleifera camellia_oleifera_snap_masked-HiC_scaffold_12-processed-gene-158.18-mRNA-1
camellia_sinensis_GWHPASIV000044 camellia_sinensis camellia_sinensis_GWHPASIV000044
camellia_sinensis_GWHPASIV000371 camellia_sinensis camellia_sinensis_GWHPASIV000371
camellia_sinensis_GWHPASIV000402 camellia_sinensis camellia_sinensis_GWHPASIV000402
camellia_sinensis_GWHPASIV005268 camellia_sinensis camellia_sinensis_GWHPASIV005268
camellia_sinensis_GWHPASIV009425 camellia_sinensis camellia_sinensis_GWHPASIV009425
camellia_sinensis_GWHPASIV010884 camellia_sinensis camellia_sinensis_GWHPASIV010884
camellia_sinensis_GWHPASIV010941 camellia_sinensis camellia_sinensis_GWHPASIV010941
camellia_sinensis_GWHPASIV014419 camellia_sinensis camellia_sinensis_GWHPASIV014419
camellia_sinensis_GWHPASIV023860 camellia_sinensis camellia_sinensis_GWHPASIV023860
camellia_sinensis_GWHPASIV032361 camellia_sinensis camellia_sinensis_GWHPASIV032361
camellia_sinensis_GWHPASIV034458 camellia_sinensis camellia_sinensis_GWHPASIV034458
camellia_sinensis_GWHPASIV039366 camellia_sinensis camellia_sinensis_GWHPASIV039366
camellia_sinensis_GWHPASIV042857 camellia_sinensis camellia_sinensis_GWHPASIV042857
Cacu08G0013970.1 camptotheca_acuminata Cacu08G0013970.1
Cacu08G0013980.1 camptotheca_acuminata Cacu08G0013980.1
Cacu11G0002450.1 camptotheca_acuminata Cacu11G0002450.1
Cacu16G0002170.1 camptotheca_acuminata Cacu16G0002170.1
Cacu17G0007430.1 camptotheca_acuminata Cacu17G0007430.1
Cacu17G0007450.1 camptotheca_acuminata Cacu17G0007450.1
capparis_spinosa_Cs01G000470.1 capparis_spinosa capparis_spinosa_Cs01G000470.1
capparis_spinosa_Cs09G013200.1 capparis_spinosa capparis_spinosa_Cs09G013200.1
capparis_spinosa_Cs19G002600.1 capparis_spinosa capparis_spinosa_Cs19G002600.1
capparis_spinosa_Cs21G000480.1 capparis_spinosa capparis_spinosa_Cs21G000480.1
CAgraScaffold6120194300.1 capsella_grandiflora CAgraScaffold6120194300.1