PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
CpluGWHAMMO000007410254380.1 calohypnum_plumiforme CpluGWHAMMO000007410254380.1
CpluGWHAMMO000007830262640.1 calohypnum_plumiforme CpluGWHAMMO000007830262640.1
CpluGWHAMMO000009070281010.1 calohypnum_plumiforme CpluGWHAMMO000009070281010.1
CpluGWHAMMO000009300286930.1 calohypnum_plumiforme CpluGWHAMMO000009300286930.1
Cgigscaffold_00001670 calotropis_gigantea Cgigscaffold_00001670
Cgigscaffold_10014740 calotropis_gigantea Cgigscaffold_10014740
Cgigscaffold_460146320 calotropis_gigantea Cgigscaffold_460146320
Cgigscaffold_840197650 calotropis_gigantea Cgigscaffold_840197650
XP_010419106.2 camelina_sativa XP_010419106.2
XP_010426963.1 camelina_sativa XP_010426963.1
XP_010451614.1 camelina_sativa XP_010451614.1
XP_010463700.1 camelina_sativa XP_010463700.1
XP_010464706.1 camelina_sativa XP_010464706.1
XP_010482945.1 camelina_sativa XP_010482945.1
XP_010485605.1 camelina_sativa XP_010485605.1
XP_010501216.1 camelina_sativa XP_010501216.1
XP_010504083.1 camelina_sativa XP_010504083.1
XP_010505261.1 camelina_sativa XP_010505261.1
XP_010509401.1 camelina_sativa XP_010509401.1
XP_010513426.1 camelina_sativa XP_010513426.1
XP_010515816.1 camelina_sativa XP_010515816.1
XP_010516949.1 camelina_sativa XP_010516949.1
XP_019089011.1 camelina_sativa XP_019089011.1
XP_019098682.1 camelina_sativa XP_019098682.1
camellia_oleifera_maker-HiC_scaffold_11-snap-gene-605.48-mRNA-1 camellia_oleifera camellia_oleifera_maker-HiC_scaffold_11-snap-gene-605.48-mRNA-1
camellia_oleifera_maker-HiC_scaffold_13-snap-gene-1046.10-mRNA-1 camellia_oleifera camellia_oleifera_maker-HiC_scaffold_13-snap-gene-1046.10-mRNA-1
camellia_oleifera_maker-HiC_scaffold_13-snap-gene-1046.11-mRNA-1 camellia_oleifera camellia_oleifera_maker-HiC_scaffold_13-snap-gene-1046.11-mRNA-1
camellia_oleifera_maker-HiC_scaffold_13-snap-gene-1047.9-mRNA-1 camellia_oleifera camellia_oleifera_maker-HiC_scaffold_13-snap-gene-1047.9-mRNA-1
camellia_oleifera_maker-HiC_scaffold_13-snap-gene-1082.12-mRNA-1 camellia_oleifera camellia_oleifera_maker-HiC_scaffold_13-snap-gene-1082.12-mRNA-1
camellia_oleifera_maker-HiC_scaffold_13-snap-gene-1082.13-mRNA-1 camellia_oleifera camellia_oleifera_maker-HiC_scaffold_13-snap-gene-1082.13-mRNA-1