PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Ccusscaffold_30087060 calliergonella_cuspidata Ccusscaffold_30087060
Ccusscaffold_40103360 calliergonella_cuspidata Ccusscaffold_40103360
Ccusscaffold_50143370 calliergonella_cuspidata Ccusscaffold_50143370
Ccusscaffold_50143380 calliergonella_cuspidata Ccusscaffold_50143380
Ccusscaffold_70201000 calliergonella_cuspidata Ccusscaffold_70201000
Ccusscaffold_70201050 calliergonella_cuspidata Ccusscaffold_70201050
Ccusscaffold_90262020 calliergonella_cuspidata Ccusscaffold_90262020
Ccusscaffold_90262050 calliergonella_cuspidata Ccusscaffold_90262050
Ccusscaffold_90262060 calliergonella_cuspidata Ccusscaffold_90262060
Ccusscaffold_90262100 calliergonella_cuspidata Ccusscaffold_90262100
Ccusscaffold_90262110 calliergonella_cuspidata Ccusscaffold_90262110
Ccusscaffold_90262150 calliergonella_cuspidata Ccusscaffold_90262150
Ccusscaffold_90262160 calliergonella_cuspidata Ccusscaffold_90262160
Ccusscaffold_90262180 calliergonella_cuspidata Ccusscaffold_90262180
Ccusscaffold_90262190 calliergonella_cuspidata Ccusscaffold_90262190
Ccusscaffold_90262210 calliergonella_cuspidata Ccusscaffold_90262210
Ccusscaffold_90262220 calliergonella_cuspidata Ccusscaffold_90262220
CpluGWHAMMO000000490007940.1 calohypnum_plumiforme CpluGWHAMMO000000490007940.1
CpluGWHAMMO000000930026300.1 calohypnum_plumiforme CpluGWHAMMO000000930026300.1
CpluGWHAMMO000000930026320.1 calohypnum_plumiforme CpluGWHAMMO000000930026320.1
CpluGWHAMMO000000930026360.1 calohypnum_plumiforme CpluGWHAMMO000000930026360.1
CpluGWHAMMO000001420047850.1 calohypnum_plumiforme CpluGWHAMMO000001420047850.1
CpluGWHAMMO000002250094280.1 calohypnum_plumiforme CpluGWHAMMO000002250094280.1
CpluGWHAMMO000002250094350.1 calohypnum_plumiforme CpluGWHAMMO000002250094350.1
CpluGWHAMMO000002290096850.1 calohypnum_plumiforme CpluGWHAMMO000002290096850.1
CpluGWHAMMO000002510107030.1 calohypnum_plumiforme CpluGWHAMMO000002510107030.1
CpluGWHAMMO000004740185900.1 calohypnum_plumiforme CpluGWHAMMO000004740185900.1
CpluGWHAMMO000006390232440.1 calohypnum_plumiforme CpluGWHAMMO000006390232440.1
CpluGWHAMMO000006390232450.1 calohypnum_plumiforme CpluGWHAMMO000006390232450.1
CpluGWHAMMO000007410254370.1 calohypnum_plumiforme CpluGWHAMMO000007410254370.1