PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Ccor1782770040130 calliergon_cordifolium Ccor1782770040130
Ccor1816020049460 calliergon_cordifolium Ccor1816020049460
Ccor2287010088950 calliergon_cordifolium Ccor2287010088950
Ccor2336270101990 calliergon_cordifolium Ccor2336270101990
Ccor2395790111570 calliergon_cordifolium Ccor2395790111570
Ccor2490240145520 calliergon_cordifolium Ccor2490240145520
Ccor2555180190430 calliergon_cordifolium Ccor2555180190430
Ccor2573940207130 calliergon_cordifolium Ccor2573940207130
Ccor2583290217570 calliergon_cordifolium Ccor2583290217570
Ccor2583290217580 calliergon_cordifolium Ccor2583290217580
Ccor2609240246660 calliergon_cordifolium Ccor2609240246660
Ccor2624800272830 calliergon_cordifolium Ccor2624800272830
Ccor2633210291380 calliergon_cordifolium Ccor2633210291380
Ccor2633210291400 calliergon_cordifolium Ccor2633210291400
Ccor2640240312920 calliergon_cordifolium Ccor2640240312920
Ccor2643560324210 calliergon_cordifolium Ccor2643560324210
Ccor2646760334590 calliergon_cordifolium Ccor2646760334590
Ccor2647820336330 calliergon_cordifolium Ccor2647820336330
Ccor2647820336340 calliergon_cordifolium Ccor2647820336340
Ccusscaffold_100025930 calliergonella_cuspidata Ccusscaffold_100025930
Ccusscaffold_100029600 calliergonella_cuspidata Ccusscaffold_100029600
Ccusscaffold_100036000 calliergonella_cuspidata Ccusscaffold_100036000
Ccusscaffold_110050360 calliergonella_cuspidata Ccusscaffold_110050360
Ccusscaffold_110050390 calliergonella_cuspidata Ccusscaffold_110050390
Ccusscaffold_110050420 calliergonella_cuspidata Ccusscaffold_110050420
Ccusscaffold_110053300 calliergonella_cuspidata Ccusscaffold_110053300
Ccusscaffold_110053340 calliergonella_cuspidata Ccusscaffold_110053340
Ccusscaffold_110053370 calliergonella_cuspidata Ccusscaffold_110053370
Ccusscaffold_110053410 calliergonella_cuspidata Ccusscaffold_110053410
Ccusscaffold_130065100 calliergonella_cuspidata Ccusscaffold_130065100