PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Ccaj03G0017980 cajanus_cajan Ccaj03G0017980
Ccaj06G0018880 cajanus_cajan Ccaj06G0018880
CcajScaffold1261050078400 cajanus_cajan CcajScaffold1261050078400
CcajScaffold1327130159480 cajanus_cajan CcajScaffold1327130159480
CcajScaffold1352980219690 cajanus_cajan CcajScaffold1352980219690
CcajScaffold1357270229110 cajanus_cajan CcajScaffold1357270229110
CcajScaffold1357390229410 cajanus_cajan CcajScaffold1357390229410
Csimscaffold11730040130 calamus_simplicifolius Csimscaffold11730040130
Csimscaffold11880043450 calamus_simplicifolius Csimscaffold11880043450
Csimscaffold19640170570 calamus_simplicifolius Csimscaffold19640170570
Csimscaffold20430182260 calamus_simplicifolius Csimscaffold20430182260
Csimscaffold2130194640 calamus_simplicifolius Csimscaffold2130194640
Csimscaffold230211590 calamus_simplicifolius Csimscaffold230211590
Csimscaffold350307940 calamus_simplicifolius Csimscaffold350307940
Csimscaffold350307950 calamus_simplicifolius Csimscaffold350307950
Csimscaffold350307960 calamus_simplicifolius Csimscaffold350307960
Csimscaffold4760366150 calamus_simplicifolius Csimscaffold4760366150
Csimscaffold5370387030 calamus_simplicifolius Csimscaffold5370387030
Csimscaffold6630423810 calamus_simplicifolius Csimscaffold6630423810
Csimscaffold7800457600 calamus_simplicifolius Csimscaffold7800457600
Csimscaffold7800457610 calamus_simplicifolius Csimscaffold7800457610
Csimscaffold7800457640 calamus_simplicifolius Csimscaffold7800457640
Csimscaffold7800457660 calamus_simplicifolius Csimscaffold7800457660
CAame07G0013430 callicarpa_americana CAame07G0013430
CAame14G0036710 callicarpa_americana CAame14G0036710
CAame14G0036730 callicarpa_americana CAame14G0036730
CAame15G0016130 callicarpa_americana CAame15G0016130
CAame17G0026070 callicarpa_americana CAame17G0026070
CAame17G0026110 callicarpa_americana CAame17G0026110
Ccor1639410026730 calliergon_cordifolium Ccor1639410026730