PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status Best Target
Csimscaffold1000002050 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold10640015950 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold10650016150 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold10970022530 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold12840061840 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold13150068600 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold13550076550 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold14020087800 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold14840101710 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold14840101720 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold15330110720 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold1600121280 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold1600121290 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold1600121300 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold17820146440 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold19500169160 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold19500169170 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold2230204890 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold23630219310 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold2410224660 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold24180225450 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold260242180 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold26290245020 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold2690250200 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold2740255980 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold2900268540 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold2900268550 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold2900268560 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold2900268590 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold31440286930 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold330296640 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold330296660 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold33290298600 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold3540310810 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold4300348680 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold4930372300 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold4930372320 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold5760398880 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold5980405300 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold6990434540 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold6990434560 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold7010436600 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold70434810 Alkaloid 16OMT low borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold70434830 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold7570451050 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold900488250 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold900488260 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold9650504240 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold9720506040 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
Csimscaffold9950511610 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO