PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX1/CYP85A1
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Gene Pathway Family Confidence Status
Csimscaffold1080019040 Steroid BR6OX1/CYP85A1 low borderline
Csimscaffold1090020920 Steroid BR6OX1/CYP85A1 low borderline
Csimscaffold110023240 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold1240054030 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold13180068960 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold13180068980 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold13180069000 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold13180069020 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold13880084220 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold20480182940 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold2240205950 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold22910210960 Steroid BR6OX1/CYP85A1 low borderline
Csimscaffold24120225100 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold3200290700 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold4420354400 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold4430354590 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold4430354610 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold520381410 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold520381420 Steroid BR6OX1/CYP85A1 low borderline
Csimscaffold7090438220 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold830470550 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold8560476460 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold9610503410 Steroid BR6OX1/CYP85A1 medium borderline
Csimscaffold9830508770 Steroid BR6OX1/CYP85A1 medium borderline