PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCoAOMT
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Gene Pathway Family Confidence Status Best Target
Csimscaffold11550035210 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold11550035220 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold11550035230 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold11550035240 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00004__sp_O49499_CAMT4_ARATH
Csimscaffold11720039460 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold11720039480 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold11860043150 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00003__sp_A0A0S2UWT1_CAMT2_PETHY
Csimscaffold13300071410 Phenylpropanoid CCoAOMT low borderline CCoAOMT__00003__sp_A0A0S2UWT1_CAMT2_PETHY
Csimscaffold1350075370 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold1530110280 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00003__sp_A0A0S2UWT1_CAMT2_PETHY
Csimscaffold16010121440 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold16010121450 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00004__sp_O49499_CAMT4_ARATH
Csimscaffold16010121460 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00003__sp_A0A0S2UWT1_CAMT2_PETHY
Csimscaffold16010121480 Phenylpropanoid CCoAOMT low borderline CCoAOMT__00004__sp_O49499_CAMT4_ARATH
Csimscaffold16910134260 Phenylpropanoid CCoAOMT low borderline CCoAOMT__00003__sp_A0A0S2UWT1_CAMT2_PETHY
Csimscaffold19530169420 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold2160197250 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold22910210970 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold34430305180 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold5460389990 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold8240468910 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00003__sp_A0A0S2UWT1_CAMT2_PETHY
Csimscaffold9850509160 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold9960511850 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY