PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
Csimscaffold11740040310 Flavonoid IFR low borderline
Csimscaffold1400087290 Flavonoid IFR low borderline
Csimscaffold1490102780 Flavonoid IFR high pass
Csimscaffold1490102820 Flavonoid IFR low borderline
Csimscaffold14920103140 Flavonoid IFR low borderline
Csimscaffold1510106770 Flavonoid IFR low borderline
Csimscaffold15140107840 Flavonoid IFR low borderline
Csimscaffold15390111530 Flavonoid IFR medium pass
Csimscaffold16230124970 Flavonoid IFR low borderline
Csimscaffold18930161460 Flavonoid IFR high pass
Csimscaffold20250179530 Flavonoid IFR medium pass
Csimscaffold20350180780 Flavonoid IFR medium pass
Csimscaffold20350180790 Flavonoid IFR high pass
Csimscaffold2070186410 Flavonoid IFR low borderline
Csimscaffold2070186430 Flavonoid IFR medium pass
Csimscaffold2070186440 Flavonoid IFR high pass
Csimscaffold20760187240 Flavonoid IFR low borderline
Csimscaffold24190225520 Flavonoid IFR low borderline
Csimscaffold2430226470 Flavonoid IFR low borderline
Csimscaffold25370236300 Flavonoid IFR low borderline
Csimscaffold2600242320 Flavonoid IFR high pass
Csimscaffold270251920 Flavonoid IFR medium pass
Csimscaffold28390263840 Flavonoid IFR high pass
Csimscaffold3200290600 Flavonoid IFR low borderline
Csimscaffold4220345230 Flavonoid IFR high pass
Csimscaffold4280347300 Flavonoid IFR high pass
Csimscaffold4470356190 Flavonoid IFR high pass
Csimscaffold5070377360 Flavonoid IFR low borderline
Csimscaffold510379010 Flavonoid IFR low borderline
Csimscaffold5440389630 Flavonoid IFR low borderline
Csimscaffold5750398590 Flavonoid IFR medium pass
Csimscaffold680428820 Flavonoid IFR low borderline
Csimscaffold6840430320 Flavonoid IFR low borderline
Csimscaffold6990434530 Flavonoid IFR low borderline
Csimscaffold7430447610 Flavonoid IFR low borderline
Csimscaffold7600451950 Flavonoid IFR medium pass
Csimscaffold8010463790 Flavonoid IFR medium pass
Csimscaffold8030463950 Flavonoid IFR high pass
Csimscaffold8030463970 Flavonoid IFR high pass
Csimscaffold8030463990 Flavonoid IFR high pass
Csimscaffold8030464000 Flavonoid IFR high pass
Csimscaffold8030464010 Flavonoid IFR medium pass