PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
Csimscaffold11730040130 Flavonoid PAL low borderline
Csimscaffold19640170570 Flavonoid PAL medium pass
Csimscaffold20430182260 Flavonoid PAL low borderline
Csimscaffold230211590 Flavonoid PAL low borderline
Csimscaffold350307940 Flavonoid PAL medium pass
Csimscaffold350307950 Flavonoid PAL medium pass
Csimscaffold350307960 Flavonoid PAL low borderline
Csimscaffold4760366150 Flavonoid PAL low borderline
Csimscaffold6630423810 Flavonoid PAL high pass
Csimscaffold7800457600 Flavonoid PAL medium pass
Csimscaffold7800457610 Flavonoid PAL medium pass
Csimscaffold7800457640 Flavonoid PAL high pass
Csimscaffold7800457660 Flavonoid PAL high pass
Csimscaffold11730040130 Phenylpropanoid PAL low borderline
Csimscaffold19640170570 Phenylpropanoid PAL medium pass
Csimscaffold20430182260 Phenylpropanoid PAL low borderline
Csimscaffold230211590 Phenylpropanoid PAL low borderline
Csimscaffold350307940 Phenylpropanoid PAL medium pass
Csimscaffold350307950 Phenylpropanoid PAL medium pass
Csimscaffold350307960 Phenylpropanoid PAL low borderline
Csimscaffold4760366150 Phenylpropanoid PAL low borderline
Csimscaffold6630423810 Phenylpropanoid PAL high pass
Csimscaffold7800457600 Phenylpropanoid PAL medium pass
Csimscaffold7800457610 Phenylpropanoid PAL medium pass
Csimscaffold7800457640 Phenylpropanoid PAL high pass
Csimscaffold7800457660 Phenylpropanoid PAL high pass
Csimscaffold11730040130 Rosmarinic Acid PAL low borderline
Csimscaffold19640170570 Rosmarinic Acid PAL medium pass
Csimscaffold20430182260 Rosmarinic Acid PAL low borderline
Csimscaffold230211590 Rosmarinic Acid PAL low borderline
Csimscaffold350307940 Rosmarinic Acid PAL medium pass
Csimscaffold350307950 Rosmarinic Acid PAL medium pass
Csimscaffold350307960 Rosmarinic Acid PAL low borderline
Csimscaffold4760366150 Rosmarinic Acid PAL low borderline
Csimscaffold6630423810 Rosmarinic Acid PAL high pass
Csimscaffold7800457600 Rosmarinic Acid PAL medium pass
Csimscaffold7800457610 Rosmarinic Acid PAL medium pass
Csimscaffold7800457640 Rosmarinic Acid PAL high pass
Csimscaffold7800457660 Rosmarinic Acid PAL high pass