PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Csimscaffold10220006990 Alkaloid T16H low borderline
Csimscaffold10220007070 Alkaloid T16H low borderline
Csimscaffold10220007100 Alkaloid T16H medium borderline
Csimscaffold10410011350 Alkaloid T16H medium borderline
Csimscaffold1150034150 Alkaloid T16H medium borderline
Csimscaffold1240054030 Alkaloid T16H medium borderline
Csimscaffold12700059540 Alkaloid T16H medium borderline
Csimscaffold14770100380 Alkaloid T16H medium borderline
Csimscaffold150104560 Alkaloid T16H medium borderline
Csimscaffold15030105760 Alkaloid T16H medium borderline
Csimscaffold15030105790 Alkaloid T16H medium borderline
Csimscaffold15300110400 Alkaloid T16H low borderline
Csimscaffold1650128290 Alkaloid T16H low borderline
Csimscaffold17000136150 Alkaloid T16H medium borderline
Csimscaffold17000136160 Alkaloid T16H medium borderline
Csimscaffold17970148250 Alkaloid T16H medium borderline
Csimscaffold19130164790 Alkaloid T16H medium borderline
Csimscaffold19830172920 Alkaloid T16H medium borderline
Csimscaffold2040181750 Alkaloid T16H medium borderline
Csimscaffold21760198910 Alkaloid T16H medium borderline
Csimscaffold22870210400 Alkaloid T16H medium borderline
Csimscaffold23330216350 Alkaloid T16H low borderline
Csimscaffold28280263130 Alkaloid T16H medium borderline
Csimscaffold29450271940 Alkaloid T16H medium borderline
Csimscaffold29810274670 Alkaloid T16H medium borderline
Csimscaffold29980275430 Alkaloid T16H medium pass
Csimscaffold30650281390 Alkaloid T16H medium borderline
Csimscaffold31710288630 Alkaloid T16H medium borderline
Csimscaffold3180289010 Alkaloid T16H medium borderline
Csimscaffold3200290810 Alkaloid T16H medium borderline
Csimscaffold34190303900 Alkaloid T16H medium pass
Csimscaffold3530310180 Alkaloid T16H medium borderline
Csimscaffold35530311610 Alkaloid T16H low borderline
Csimscaffold39250329920 Alkaloid T16H medium borderline
Csimscaffold43240349790 Alkaloid T16H medium borderline
Csimscaffold4860369890 Alkaloid T16H medium borderline
Csimscaffold5290384260 Alkaloid T16H medium borderline
Csimscaffold6120409640 Alkaloid T16H medium borderline
Csimscaffold6280414040 Alkaloid T16H medium borderline
Csimscaffold6440418550 Alkaloid T16H medium borderline
Csimscaffold7020436990 Alkaloid T16H medium borderline
Csimscaffold7700454870 Alkaloid T16H low borderline
Csimscaffold770454480 Alkaloid T16H medium borderline
Csimscaffold7940460680 Alkaloid T16H medium borderline
Csimscaffold7940460690 Alkaloid T16H medium borderline
Csimscaffold7980461380 Alkaloid T16H medium borderline
Csimscaffold80462160 Alkaloid T16H medium borderline
Csimscaffold8060464650 Alkaloid T16H medium borderline
Csimscaffold8160467070 Alkaloid T16H medium borderline
Csimscaffold830470600 Alkaloid T16H medium borderline