PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status Best Target
Csimscaffold1180041590 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold1180041610 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold1180041620 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold13100067980 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
Csimscaffold13100067990 Alkaloid COR low borderline COR__00001__sp_B9VRJ2_COR15_PAPSO
Csimscaffold13430073740 Alkaloid COR low borderline COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold15500113400 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold17470142130 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold18170151790 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold24140225210 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold24140225230 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold24360227080 Alkaloid COR medium pass COR__00003__sp_Q9SQ68_COR13_PAPSO
Csimscaffold24360227090 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold24360227100 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold2530235590 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Csimscaffold33630300650 Alkaloid COR medium pass COR__00003__sp_Q9SQ68_COR13_PAPSO
Csimscaffold33630300660 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold33630300670 Alkaloid COR medium pass COR__00003__sp_Q9SQ68_COR13_PAPSO
Csimscaffold33630300680 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold480368150 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold5780399380 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold7570451100 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold7570451120 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold7570451130 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Csimscaffold9840509150 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO