PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status
Csimscaffold10430011630 Phenylpropanoid CCR medium pass
Csimscaffold10640015930 Phenylpropanoid CCR medium borderline
Csimscaffold110022860 Phenylpropanoid CCR medium borderline
Csimscaffold110022870 Phenylpropanoid CCR medium borderline
Csimscaffold110022880 Phenylpropanoid CCR low borderline
Csimscaffold110022890 Phenylpropanoid CCR medium borderline
Csimscaffold11970045400 Phenylpropanoid CCR low borderline
Csimscaffold12140049390 Phenylpropanoid CCR medium borderline
Csimscaffold12140049400 Phenylpropanoid CCR medium borderline
Csimscaffold12140049410 Phenylpropanoid CCR medium borderline
Csimscaffold12140049420 Phenylpropanoid CCR medium borderline
Csimscaffold1270059260 Phenylpropanoid CCR medium borderline
Csimscaffold1270059270 Phenylpropanoid CCR medium borderline
Csimscaffold13750081480 Phenylpropanoid CCR medium pass
Csimscaffold140086540 Phenylpropanoid CCR low borderline
Csimscaffold14110089180 Phenylpropanoid CCR medium borderline
Csimscaffold16670130790 Phenylpropanoid CCR medium pass
Csimscaffold1730140030 Phenylpropanoid CCR low borderline
Csimscaffold17860146910 Phenylpropanoid CCR medium borderline
Csimscaffold19370167370 Phenylpropanoid CCR medium pass
Csimscaffold19840173010 Phenylpropanoid CCR medium borderline
Csimscaffold21070192090 Phenylpropanoid CCR medium pass
Csimscaffold24230226070 Phenylpropanoid CCR low borderline
Csimscaffold26540247240 Phenylpropanoid CCR low borderline
Csimscaffold28010261480 Phenylpropanoid CCR medium borderline
Csimscaffold28010261490 Phenylpropanoid CCR medium borderline
Csimscaffold310284070 Phenylpropanoid CCR medium pass
Csimscaffold3110284920 Phenylpropanoid CCR medium pass
Csimscaffold3490307520 Phenylpropanoid CCR medium pass
Csimscaffold37250320150 Phenylpropanoid CCR medium borderline
Csimscaffold4430354840 Phenylpropanoid CCR medium borderline
Csimscaffold46490362610 Phenylpropanoid CCR medium borderline
Csimscaffold4820368810 Phenylpropanoid CCR medium pass
Csimscaffold490371210 Phenylpropanoid CCR medium borderline
Csimscaffold4970373820 Phenylpropanoid CCR low borderline
Csimscaffold5480390700 Phenylpropanoid CCR medium borderline
Csimscaffold5480390710 Phenylpropanoid CCR medium borderline
Csimscaffold5480390720 Phenylpropanoid CCR medium borderline
Csimscaffold5600394240 Phenylpropanoid CCR medium pass
Csimscaffold570396820 Phenylpropanoid CCR medium pass
Csimscaffold6680424920 Phenylpropanoid CCR medium borderline
Csimscaffold6680424950 Phenylpropanoid CCR medium borderline
Csimscaffold6680424960 Phenylpropanoid CCR medium borderline
Csimscaffold6680424970 Phenylpropanoid CCR medium borderline
Csimscaffold6680424980 Phenylpropanoid CCR medium borderline
Csimscaffold6680424990 Phenylpropanoid CCR medium borderline
Csimscaffold6680425000 Phenylpropanoid CCR medium borderline
Csimscaffold6680425010 Phenylpropanoid CCR medium borderline
Csimscaffold6710426360 Phenylpropanoid CCR medium borderline
Csimscaffold9790507630 Phenylpropanoid CCR medium borderline