PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
Csimscaffold11560035470 Alkaloid CODM/T6ODM medium borderline
Csimscaffold11660037800 Alkaloid CODM/T6ODM medium borderline
Csimscaffold13980085800 Alkaloid CODM/T6ODM medium borderline
Csimscaffold1430092570 Alkaloid CODM/T6ODM medium borderline
Csimscaffold14320092920 Alkaloid CODM/T6ODM medium borderline
Csimscaffold14430094680 Alkaloid CODM/T6ODM medium borderline
Csimscaffold14430094690 Alkaloid CODM/T6ODM medium borderline
Csimscaffold14500096210 Alkaloid CODM/T6ODM medium borderline
Csimscaffold14990103800 Alkaloid CODM/T6ODM medium borderline
Csimscaffold160120950 Alkaloid CODM/T6ODM low borderline
Csimscaffold16750131960 Alkaloid CODM/T6ODM medium borderline
Csimscaffold17200138930 Alkaloid CODM/T6ODM medium borderline
Csimscaffold18030149920 Alkaloid CODM/T6ODM medium borderline
Csimscaffold18240153070 Alkaloid CODM/T6ODM medium borderline
Csimscaffold18240153100 Alkaloid CODM/T6ODM medium borderline
Csimscaffold1850156260 Alkaloid CODM/T6ODM low borderline
Csimscaffold19310166860 Alkaloid CODM/T6ODM medium borderline
Csimscaffold19510169300 Alkaloid CODM/T6ODM medium borderline
Csimscaffold2160197490 Alkaloid CODM/T6ODM medium borderline
Csimscaffold22510207340 Alkaloid CODM/T6ODM medium borderline
Csimscaffold2310213790 Alkaloid CODM/T6ODM medium borderline
Csimscaffold23200215220 Alkaloid CODM/T6ODM medium borderline
Csimscaffold23200215230 Alkaloid CODM/T6ODM medium borderline
Csimscaffold23730220240 Alkaloid CODM/T6ODM medium borderline
Csimscaffold23730220250 Alkaloid CODM/T6ODM medium borderline
Csimscaffold23730220260 Alkaloid CODM/T6ODM medium borderline
Csimscaffold25200235200 Alkaloid CODM/T6ODM medium borderline
Csimscaffold2630245280 Alkaloid CODM/T6ODM medium borderline
Csimscaffold27920259600 Alkaloid CODM/T6ODM medium borderline
Csimscaffold32250292220 Alkaloid CODM/T6ODM medium borderline
Csimscaffold3550311500 Alkaloid CODM/T6ODM medium borderline
Csimscaffold3550311510 Alkaloid CODM/T6ODM medium borderline
Csimscaffold3550311520 Alkaloid CODM/T6ODM medium borderline
Csimscaffold3550311530 Alkaloid CODM/T6ODM medium borderline
Csimscaffold3550311540 Alkaloid CODM/T6ODM medium borderline
Csimscaffold3550311550 Alkaloid CODM/T6ODM medium borderline
Csimscaffold36730317530 Alkaloid CODM/T6ODM medium borderline
Csimscaffold37330320540 Alkaloid CODM/T6ODM medium borderline
Csimscaffold40850338490 Alkaloid CODM/T6ODM medium borderline
Csimscaffold430348250 Alkaloid CODM/T6ODM medium borderline
Csimscaffold4340350220 Alkaloid CODM/T6ODM medium borderline
Csimscaffold43500350820 Alkaloid CODM/T6ODM medium borderline
Csimscaffold470364280 Alkaloid CODM/T6ODM medium borderline
Csimscaffold4790367190 Alkaloid CODM/T6ODM medium borderline
Csimscaffold4970373640 Alkaloid CODM/T6ODM medium borderline
Csimscaffold500375150 Alkaloid CODM/T6ODM medium borderline
Csimscaffold500375170 Alkaloid CODM/T6ODM medium borderline
Csimscaffold5120379730 Alkaloid CODM/T6ODM medium borderline
Csimscaffold5240383060 Alkaloid CODM/T6ODM medium borderline
Csimscaffold5300385350 Alkaloid CODM/T6ODM medium borderline