PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
Csimscaffold10110004430 Steroid CYP90D1 low borderline
Csimscaffold10550013880 Steroid CYP90D1 low borderline
Csimscaffold10550013890 Steroid CYP90D1 low borderline
Csimscaffold10700017470 Steroid CYP90D1 medium borderline
Csimscaffold1090021150 Steroid CYP90D1 low borderline
Csimscaffold11110026240 Steroid CYP90D1 medium borderline
Csimscaffold13450074270 Steroid CYP90D1 low borderline
Csimscaffold14180090210 Steroid CYP90D1 medium borderline
Csimscaffold14360093500 Steroid CYP90D1 low borderline
Csimscaffold14850101790 Steroid CYP90D1 low borderline
Csimscaffold15150107900 Steroid CYP90D1 low borderline
Csimscaffold1690134000 Steroid CYP90D1 medium borderline
Csimscaffold17290139800 Steroid CYP90D1 medium borderline
Csimscaffold1830153920 Steroid CYP90D1 low borderline
Csimscaffold18780159380 Steroid CYP90D1 low borderline
Csimscaffold2200202020 Steroid CYP90D1 medium borderline
Csimscaffold22030202370 Steroid CYP90D1 low borderline
Csimscaffold22030202380 Steroid CYP90D1 low borderline
Csimscaffold22870210390 Steroid CYP90D1 low borderline
Csimscaffold22870210400 Steroid CYP90D1 low borderline
Csimscaffold2760257200 Steroid CYP90D1 low borderline
Csimscaffold290267970 Steroid CYP90D1 low borderline
Csimscaffold29450271940 Steroid CYP90D1 low borderline
Csimscaffold31040284680 Steroid CYP90D1 low borderline
Csimscaffold3850325870 Steroid CYP90D1 medium borderline
Csimscaffold3910329280 Steroid CYP90D1 low borderline
Csimscaffold4330350070 Steroid CYP90D1 medium borderline
Csimscaffold4480356510 Steroid CYP90D1 low borderline
Csimscaffold4770366540 Steroid CYP90D1 medium borderline
Csimscaffold4870370250 Steroid CYP90D1 medium borderline
Csimscaffold590402460 Steroid CYP90D1 low borderline
Csimscaffold6050407860 Steroid CYP90D1 low borderline
Csimscaffold6120409640 Steroid CYP90D1 low borderline
Csimscaffold700435960 Steroid CYP90D1 low borderline
Csimscaffold70435260 Steroid CYP90D1 low borderline
Csimscaffold8810482940 Steroid CYP90D1 medium borderline
Csimscaffold9300496360 Steroid CYP90D1 low borderline
Csimscaffold9330496850 Steroid CYP90D1 medium borderline