PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
Csimscaffold11150026690 Alkaloid SLS medium borderline
Csimscaffold13540076320 Alkaloid SLS low borderline
Csimscaffold13810083210 Alkaloid SLS medium borderline
Csimscaffold13810083260 Alkaloid SLS medium borderline
Csimscaffold13810083270 Alkaloid SLS medium borderline
Csimscaffold14850101790 Alkaloid SLS medium borderline
Csimscaffold15150107910 Alkaloid SLS medium borderline
Csimscaffold15150107940 Alkaloid SLS medium borderline
Csimscaffold1680132820 Alkaloid SLS medium borderline
Csimscaffold16920134390 Alkaloid SLS medium borderline
Csimscaffold17490142290 Alkaloid SLS medium borderline
Csimscaffold17490142300 Alkaloid SLS medium borderline
Csimscaffold17490142310 Alkaloid SLS medium borderline
Csimscaffold18610157670 Alkaloid SLS medium borderline
Csimscaffold18610157680 Alkaloid SLS medium borderline
Csimscaffold20770187440 Alkaloid SLS medium borderline
Csimscaffold21600197560 Alkaloid SLS medium borderline
Csimscaffold21600197580 Alkaloid SLS medium borderline
Csimscaffold21600197610 Alkaloid SLS medium borderline
Csimscaffold22250204530 Alkaloid SLS medium borderline
Csimscaffold22750209200 Alkaloid SLS medium borderline
Csimscaffold26670248400 Alkaloid SLS medium borderline
Csimscaffold3070281710 Alkaloid SLS medium borderline
Csimscaffold3620315130 Alkaloid SLS medium borderline
Csimscaffold3710319560 Alkaloid SLS medium borderline
Csimscaffold4410354050 Alkaloid SLS medium borderline
Csimscaffold450357170 Alkaloid SLS medium borderline
Csimscaffold460361080 Alkaloid SLS medium borderline
Csimscaffold5000375530 Alkaloid SLS medium borderline
Csimscaffold5690396290 Alkaloid SLS medium borderline
Csimscaffold5870401610 Alkaloid SLS medium borderline
Csimscaffold590402450 Alkaloid SLS medium borderline
Csimscaffold590402460 Alkaloid SLS medium borderline
Csimscaffold740446850 Alkaloid SLS medium borderline
Csimscaffold9800508260 Alkaloid SLS medium borderline