PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
Csimscaffold10000740 Flavonoid UFGT medium pass
Csimscaffold10001010 Flavonoid UFGT medium pass
Csimscaffold10001040 Flavonoid UFGT high pass
Csimscaffold10001050 Flavonoid UFGT high pass
Csimscaffold10001080 Flavonoid UFGT high pass
Csimscaffold10360009860 Flavonoid UFGT medium pass
Csimscaffold10410011410 Flavonoid UFGT medium pass
Csimscaffold10410011420 Flavonoid UFGT medium pass
Csimscaffold10410011430 Flavonoid UFGT high pass
Csimscaffold10410011440 Flavonoid UFGT high pass
Csimscaffold10620015750 Flavonoid UFGT medium pass
Csimscaffold10790018720 Flavonoid UFGT medium pass
Csimscaffold10870020340 Flavonoid UFGT low borderline
Csimscaffold10870020570 Flavonoid UFGT high pass
Csimscaffold11060024840 Flavonoid UFGT high pass
Csimscaffold11100025950 Flavonoid UFGT medium pass
Csimscaffold1120027400 Flavonoid UFGT medium pass
Csimscaffold1120027430 Flavonoid UFGT medium pass
Csimscaffold1120027450 Flavonoid UFGT medium pass
Csimscaffold11350030980 Flavonoid UFGT high pass
Csimscaffold11540035060 Flavonoid UFGT high pass
Csimscaffold11620036950 Flavonoid UFGT medium pass
Csimscaffold1170038690 Flavonoid UFGT medium pass
Csimscaffold1170038700 Flavonoid UFGT low borderline
Csimscaffold11750040460 Flavonoid UFGT low borderline
Csimscaffold12230051260 Flavonoid UFGT medium pass
Csimscaffold12430054640 Flavonoid UFGT low borderline
Csimscaffold12650058500 Flavonoid UFGT medium pass
Csimscaffold12720059730 Flavonoid UFGT low borderline
Csimscaffold13060066730 Flavonoid UFGT high pass
Csimscaffold1350075550 Flavonoid UFGT medium pass
Csimscaffold1350075560 Flavonoid UFGT medium pass
Csimscaffold13750081450 Flavonoid UFGT medium pass
Csimscaffold1460097560 Flavonoid UFGT medium pass
Csimscaffold1460097580 Flavonoid UFGT high pass
Csimscaffold1460097590 Flavonoid UFGT high pass
Csimscaffold1460097600 Flavonoid UFGT high pass
Csimscaffold1460097650 Flavonoid UFGT high pass
Csimscaffold1460097660 Flavonoid UFGT high pass
Csimscaffold1460097710 Flavonoid UFGT high pass
Csimscaffold14720099870 Flavonoid UFGT medium pass
Csimscaffold150104070 Flavonoid UFGT high pass
Csimscaffold15390111580 Flavonoid UFGT medium pass
Csimscaffold15450112490 Flavonoid UFGT medium pass
Csimscaffold1550113240 Flavonoid UFGT high pass
Csimscaffold15580114280 Flavonoid UFGT high pass
Csimscaffold15580114290 Flavonoid UFGT medium pass
Csimscaffold15800118020 Flavonoid UFGT medium pass
Csimscaffold15800118030 Flavonoid UFGT high pass
Csimscaffold16030121690 Flavonoid UFGT high pass