PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Csimscaffold13510075790 Terpenoid AACT medium borderline
Csimscaffold21730198710 Terpenoid AACT medium borderline
Csimscaffold2590241000 Terpenoid AACT medium borderline
Csimscaffold35800312740 Terpenoid AACT low borderline
Csimscaffold3630315550 Terpenoid AACT medium borderline
Csimscaffold440353180 Terpenoid AACT medium pass
Csimscaffold5610394490 Terpenoid AACT low borderline
Csimscaffold10000002300 Terpenoid BAHD medium pass
Csimscaffold1000002230 Terpenoid BAHD medium pass
Csimscaffold100001170 Terpenoid BAHD medium pass
Csimscaffold10010002510 Terpenoid BAHD low borderline
Csimscaffold10010002530 Terpenoid BAHD low borderline
Csimscaffold10010002550 Terpenoid BAHD low borderline
Csimscaffold10010002560 Terpenoid BAHD low borderline
Csimscaffold1010004030 Terpenoid BAHD medium pass
Csimscaffold10120004770 Terpenoid BAHD medium pass
Csimscaffold1020006170 Terpenoid BAHD medium pass
Csimscaffold10520013430 Terpenoid BAHD low borderline
Csimscaffold10650016100 Terpenoid BAHD medium pass
Csimscaffold10680016590 Terpenoid BAHD low borderline
Csimscaffold1070017160 Terpenoid BAHD medium pass
Csimscaffold1070017190 Terpenoid BAHD low borderline
Csimscaffold10730017910 Terpenoid BAHD medium pass
Csimscaffold11190027280 Terpenoid BAHD medium pass
Csimscaffold11190027300 Terpenoid BAHD medium pass
Csimscaffold1120027600 Terpenoid BAHD low borderline
Csimscaffold1120027610 Terpenoid BAHD low borderline
Csimscaffold11210028270 Terpenoid BAHD low borderline
Csimscaffold11280029470 Terpenoid BAHD low borderline
Csimscaffold1130029850 Terpenoid BAHD medium pass
Csimscaffold11310030380 Terpenoid BAHD medium pass
Csimscaffold11430032620 Terpenoid BAHD medium pass
Csimscaffold11440032760 Terpenoid BAHD medium pass
Csimscaffold11440032770 Terpenoid BAHD medium pass
Csimscaffold11440032780 Terpenoid BAHD medium pass
Csimscaffold1150033860 Terpenoid BAHD medium pass
Csimscaffold1160036040 Terpenoid BAHD medium pass
Csimscaffold11650037690 Terpenoid BAHD medium pass
Csimscaffold1170038980 Terpenoid BAHD medium pass
Csimscaffold1170038990 Terpenoid BAHD low borderline
Csimscaffold11730040140 Terpenoid BAHD low borderline
Csimscaffold11780041030 Terpenoid BAHD medium pass
Csimscaffold1180041400 Terpenoid BAHD low borderline
Csimscaffold1180041410 Terpenoid BAHD medium pass
Csimscaffold1180041420 Terpenoid BAHD medium pass
Csimscaffold1180041440 Terpenoid BAHD medium pass
Csimscaffold11910044370 Terpenoid BAHD medium pass
Csimscaffold12110048960 Terpenoid BAHD low borderline
Csimscaffold12110049000 Terpenoid BAHD medium pass
Csimscaffold12140049460 Terpenoid BAHD medium pass