PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Csimscaffold10570014260 Alkaloid GS medium pass
Csimscaffold11060024870 Alkaloid GS high pass
Csimscaffold11870043310 Alkaloid GS medium pass
Csimscaffold12110049180 Alkaloid GS high pass
Csimscaffold13220069870 Alkaloid GS high pass
Csimscaffold13400073270 Alkaloid GS high pass
Csimscaffold1380082680 Alkaloid GS high pass
Csimscaffold14200090830 Alkaloid GS low borderline
Csimscaffold14210090880 Alkaloid GS high pass
Csimscaffold15350111050 Alkaloid GS low borderline
Csimscaffold1550113130 Alkaloid GS medium pass
Csimscaffold15580114300 Alkaloid GS low borderline
Csimscaffold16150123570 Alkaloid GS medium pass
Csimscaffold16950134710 Alkaloid GS high pass
Csimscaffold16950134730 Alkaloid GS high pass
Csimscaffold16950134740 Alkaloid GS medium pass
Csimscaffold1760143870 Alkaloid GS low borderline
Csimscaffold1940167660 Alkaloid GS low borderline
Csimscaffold2060184930 Alkaloid GS medium pass
Csimscaffold2060184940 Alkaloid GS medium pass
Csimscaffold210190960 Alkaloid GS low borderline
Csimscaffold22590207770 Alkaloid GS low borderline
Csimscaffold2300212900 Alkaloid GS high pass
Csimscaffold2300212910 Alkaloid GS high pass
Csimscaffold24160225340 Alkaloid GS high pass
Csimscaffold24160225380 Alkaloid GS high pass
Csimscaffold2470230450 Alkaloid GS low borderline
Csimscaffold2510233970 Alkaloid GS low borderline
Csimscaffold2590240810 Alkaloid GS high pass
Csimscaffold2740255390 Alkaloid GS high pass
Csimscaffold2740255400 Alkaloid GS high pass
Csimscaffold290267980 Alkaloid GS high pass
Csimscaffold290268000 Alkaloid GS high pass
Csimscaffold29250270620 Alkaloid GS high pass
Csimscaffold29780274040 Alkaloid GS low borderline
Csimscaffold310283690 Alkaloid GS high pass
Csimscaffold37810322480 Alkaloid GS high pass
Csimscaffold40150335480 Alkaloid GS high pass
Csimscaffold4060337430 Alkaloid GS low borderline
Csimscaffold4190343350 Alkaloid GS high pass
Csimscaffold4860369840 Alkaloid GS low borderline
Csimscaffold4970373420 Alkaloid GS low borderline
Csimscaffold5570393090 Alkaloid GS high pass
Csimscaffold5570393100 Alkaloid GS high pass
Csimscaffold5570393120 Alkaloid GS high pass
Csimscaffold5570393130 Alkaloid GS medium pass
Csimscaffold5570393140 Alkaloid GS medium pass
Csimscaffold5570393160 Alkaloid GS high pass
Csimscaffold6830430120 Alkaloid GS medium pass
Csimscaffold6830430150 Alkaloid GS high pass