PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
Csimscaffold11020024100 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold11970045370 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold1210048700 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold14360093520 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold14910102940 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold14910102950 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold150104000 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Csimscaffold1570116340 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold15800117920 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold15880118710 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold16980135080 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold16980135120 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold16980135130 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold17270139690 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold17310140330 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold17760145400 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold17760145420 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold17760145460 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold18570157120 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold18910161250 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold19820172860 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold20680185940 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold23630219340 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold2440227810 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Csimscaffold24780230980 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Csimscaffold26570247360 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold28240262920 Phenylpropanoid CSE low borderline CSE__00002__sp_Q9C942_CSE_ARATH
Csimscaffold2980274260 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold3000277580 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold3000277590 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold3020278550 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold34910307650 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Csimscaffold35830312810 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold41210340930 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold4260346580 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Csimscaffold4310349100 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold4950372650 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Csimscaffold5630394970 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold600406350 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411550 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411560 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411580 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411590 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411630 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411640 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold620411650 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold6410417700 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold680428810 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Csimscaffold7020436970 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Csimscaffold7140439770 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL