PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DFR
Reset
Gene Pathway Family Confidence Status
Csimscaffold1010003930 Flavonoid DFR medium borderline
Csimscaffold10740018030 Flavonoid DFR low borderline
Csimscaffold110022860 Flavonoid DFR medium borderline
Csimscaffold110022880 Flavonoid DFR medium pass
Csimscaffold110022890 Flavonoid DFR medium borderline
Csimscaffold12140049410 Flavonoid DFR medium borderline
Csimscaffold1270059260 Flavonoid DFR medium borderline
Csimscaffold13380072360 Flavonoid DFR medium borderline
Csimscaffold1380082970 Flavonoid DFR medium borderline
Csimscaffold140086540 Flavonoid DFR medium borderline
Csimscaffold14110089180 Flavonoid DFR medium borderline
Csimscaffold14140089660 Flavonoid DFR medium borderline
Csimscaffold16460127780 Flavonoid DFR medium borderline
Csimscaffold17860146910 Flavonoid DFR medium borderline
Csimscaffold19370167370 Flavonoid DFR medium borderline
Csimscaffold19840173010 Flavonoid DFR medium borderline
Csimscaffold21070192090 Flavonoid DFR medium borderline
Csimscaffold24230226070 Flavonoid DFR medium borderline
Csimscaffold24230226080 Flavonoid DFR medium borderline
Csimscaffold26070243040 Flavonoid DFR medium borderline
Csimscaffold3480306800 Flavonoid DFR medium borderline
Csimscaffold3490307520 Flavonoid DFR medium borderline
Csimscaffold3490307530 Flavonoid DFR medium borderline
Csimscaffold38540326030 Flavonoid DFR low borderline
Csimscaffold3980332360 Flavonoid DFR medium borderline
Csimscaffold4820368810 Flavonoid DFR medium borderline
Csimscaffold5530392030 Flavonoid DFR low borderline
Csimscaffold5600394240 Flavonoid DFR medium borderline
Csimscaffold570396820 Flavonoid DFR medium borderline
Csimscaffold6470419070 Flavonoid DFR medium borderline
Csimscaffold6680424920 Flavonoid DFR low borderline
Csimscaffold6680424950 Flavonoid DFR medium borderline
Csimscaffold6680424990 Flavonoid DFR medium borderline
Csimscaffold6680425000 Flavonoid DFR low borderline
Csimscaffold6680425010 Flavonoid DFR medium borderline
Csimscaffold710438730 Flavonoid DFR low borderline
Csimscaffold8620478250 Flavonoid DFR medium borderline