PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Bknoscaffold_210476250 bryum_knowltonii Bknoscaffold_210476250
Bknoscaffold_40571480 bryum_knowltonii Bknoscaffold_40571480
Baphcontig_2400078100 buxbaumia_aphylla Baphcontig_2400078100
Baphcontig_4520175150 buxbaumia_aphylla Baphcontig_4520175150
Baphcontig_4520175160 buxbaumia_aphylla Baphcontig_4520175160
Baphcontig_4670184680 buxbaumia_aphylla Baphcontig_4670184680
Baphcontig_700300370 buxbaumia_aphylla Baphcontig_700300370
Baphcontig_8130364060 buxbaumia_aphylla Baphcontig_8130364060
Baphcontig_8130364120 buxbaumia_aphylla Baphcontig_8130364120
Baphcontig_850380570 buxbaumia_aphylla Baphcontig_850380570
Baphcontig_850380620 buxbaumia_aphylla Baphcontig_850380620
GWHPBHNJ002156 buxus_austroyunnanensis GWHPBHNJ002156
GWHPBHNJ003816 buxus_austroyunnanensis GWHPBHNJ003816
GWHPBHNJ006087 buxus_austroyunnanensis GWHPBHNJ006087
GWHPBHNJ006088 buxus_austroyunnanensis GWHPBHNJ006088
GWHPBHNJ007550 buxus_austroyunnanensis GWHPBHNJ007550
GWHPBHNJ013174 buxus_austroyunnanensis GWHPBHNJ013174
GWHPBHNJ013281 buxus_austroyunnanensis GWHPBHNJ013281
GWHPBHNJ013908 buxus_austroyunnanensis GWHPBHNJ013908
buxus_sinica_BUSI_000914-RA buxus_sinica buxus_sinica_BUSI_000914-RA
buxus_sinica_BUSI_002932-RA buxus_sinica buxus_sinica_BUSI_002932-RA
buxus_sinica_BUSI_004399-RA buxus_sinica buxus_sinica_BUSI_004399-RA
buxus_sinica_BUSI_004401-RA buxus_sinica buxus_sinica_BUSI_004401-RA
buxus_sinica_BUSI_004403-RA buxus_sinica buxus_sinica_BUSI_004403-RA
buxus_sinica_BUSI_013795-RA buxus_sinica buxus_sinica_BUSI_013795-RA
buxus_sinica_BUSI_016367-RA buxus_sinica buxus_sinica_BUSI_016367-RA
buxus_sinica_BUSI_020388-RA buxus_sinica buxus_sinica_BUSI_020388-RA
buxus_sinica_BUSI_021592-RA buxus_sinica buxus_sinica_BUSI_021592-RA
buxus_sinica_BUSI_025002-RA buxus_sinica buxus_sinica_BUSI_025002-RA
Ccaj03G0015240 cajanus_cajan Ccaj03G0015240