PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
cinchona_pubescens_g25082.t1 cinchona_pubescens cinchona_pubescens_g25082.t1
cinchona_pubescens_g27750.t1 cinchona_pubescens cinchona_pubescens_g27750.t1
cinchona_pubescens_g30217.t1 cinchona_pubescens cinchona_pubescens_g30217.t1
cinchona_pubescens_g30218.t1 cinchona_pubescens cinchona_pubescens_g30218.t1
cinchona_pubescens_g30220.t1 cinchona_pubescens cinchona_pubescens_g30220.t1
cinchona_pubescens_g30222.t1 cinchona_pubescens cinchona_pubescens_g30222.t1
cinchona_pubescens_g30223.t1 cinchona_pubescens cinchona_pubescens_g30223.t1
cinchona_pubescens_g30425.t1 cinchona_pubescens cinchona_pubescens_g30425.t1
cinchona_pubescens_g34332.t1 cinchona_pubescens cinchona_pubescens_g34332.t1
cinchona_pubescens_g34616.t1 cinchona_pubescens cinchona_pubescens_g34616.t1
cinchona_pubescens_g35038.t1 cinchona_pubescens cinchona_pubescens_g35038.t1
cinchona_pubescens_g37642.t1 cinchona_pubescens cinchona_pubescens_g37642.t1
cinchona_pubescens_g38184.t1 cinchona_pubescens cinchona_pubescens_g38184.t1
cinchona_pubescens_g38637.t1 cinchona_pubescens cinchona_pubescens_g38637.t1
cinchona_pubescens_g45727.t1 cinchona_pubescens cinchona_pubescens_g45727.t1
cinchona_pubescens_g52010.t1 cinchona_pubescens cinchona_pubescens_g52010.t1
cinchona_pubescens_g52758.t1 cinchona_pubescens cinchona_pubescens_g52758.t1
cinchona_pubescens_g52759.t1 cinchona_pubescens cinchona_pubescens_g52759.t1
cinchona_pubescens_g53355.t1 cinchona_pubescens cinchona_pubescens_g53355.t1
cinchona_pubescens_g54284.t1 cinchona_pubescens cinchona_pubescens_g54284.t1
cinchona_pubescens_g6225.t1 cinchona_pubescens cinchona_pubescens_g6225.t1
cinchona_pubescens_g6228.t1 cinchona_pubescens cinchona_pubescens_g6228.t1
cinchona_pubescens_g6232.t1 cinchona_pubescens cinchona_pubescens_g6232.t1
cinchona_pubescens_g68650.t1 cinchona_pubescens cinchona_pubescens_g68650.t1
cinchona_pubescens_g7599.t1 cinchona_pubescens cinchona_pubescens_g7599.t1
cinnamomum_camphora_GWHPBGXC007656 cinnamomum_camphora cinnamomum_camphora_GWHPBGXC007656
cinnamomum_camphora_GWHPBGXC008014 cinnamomum_camphora cinnamomum_camphora_GWHPBGXC008014
cinnamomum_camphora_GWHPBGXC010700 cinnamomum_camphora cinnamomum_camphora_GWHPBGXC010700
cinnamomum_camphora_GWHPBGXC013490 cinnamomum_camphora cinnamomum_camphora_GWHPBGXC013490
cinnamomum_camphora_GWHPBGXC017419 cinnamomum_camphora cinnamomum_camphora_GWHPBGXC017419