PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
coix_lacryma-jobi_GWHPAAYR009982 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR009982
coix_lacryma-jobi_GWHPAAYR024945 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR024945
coix_lacryma-jobi_GWHPAAYR025830 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR025830
coix_lacryma-jobi_GWHPAAYR025831 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR025831
coix_lacryma-jobi_GWHPAAYR032965 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR032965
coix_lacryma-jobi_GWHPAAYR046933 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR046933
coix_lacryma-jobi_GWHPAAYR049536 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR049536
coix_lacryma-jobi_GWHPAAYR062946 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR062946
coix_lacryma-jobi_GWHPAAYR062947 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR062947
coix_lacryma-jobi_GWHPAAYR063557 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR063557
coix_lacryma-jobi_GWHPAAYR063560 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR063560
coix_lacryma-jobi_GWHPAAYR067884 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR067884
coix_lacryma-jobi_GWHPAAYR068546 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR068546
coix_lacryma-jobi_GWHPAAYR068547 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR068547
coix_lacryma-jobi_GWHPAAYR068548 coix_lacryma_jobi coix_lacryma-jobi_GWHPAAYR068548
colocasia_esculenta_EVM0006226.1 colocasia_esculenta colocasia_esculenta_EVM0006226.1
colocasia_esculenta_EVM0007226.1 colocasia_esculenta colocasia_esculenta_EVM0007226.1
colocasia_esculenta_EVM0009565.1 colocasia_esculenta colocasia_esculenta_EVM0009565.1
colocasia_esculenta_EVM0009842.1 colocasia_esculenta colocasia_esculenta_EVM0009842.1
colocasia_esculenta_EVM0021655.1 colocasia_esculenta colocasia_esculenta_EVM0021655.1
colocasia_esculenta_EVM0026471.1 colocasia_esculenta colocasia_esculenta_EVM0026471.1
colocasia_esculenta_EVM0027699.1 colocasia_esculenta colocasia_esculenta_EVM0027699.1
Cconscaffold_40084880 conocephalum_conicum Cconscaffold_40084880
Cconscaffold_40095260 conocephalum_conicum Cconscaffold_40095260
Cconscaffold_40097900 conocephalum_conicum Cconscaffold_40097900
Cconscaffold_50114920 conocephalum_conicum Cconscaffold_50114920
Cconscaffold_50114930 conocephalum_conicum Cconscaffold_50114930
Cconscaffold_50114950 conocephalum_conicum Cconscaffold_50114950
Cconscaffold_50114960 conocephalum_conicum Cconscaffold_50114960
Cconscaffold_50115910 conocephalum_conicum Cconscaffold_50115910