PMK

Atlas summary family PMK.

Lineage Coverage

Detected in 734 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
cissus_rotundifolia_CRGY0227106.1	cissus_rotundifolia	cissus_rotundifolia_CRGY0227106.1
citrullus_lanatus_ClG42_09g0115600.10	citrullus_lanatus	citrullus_lanatus_ClG42_09g0115600.10
citrullus_lanatus_ClG42_09g0197900.10	citrullus_lanatus	citrullus_lanatus_ClG42_09g0197900.10
citrullus_lanatus_ClG42_10g0012700.10	citrullus_lanatus	citrullus_lanatus_ClG42_10g0012700.10
citrus_australis_GWHPBQDX009024	citrus_australis	citrus_australis_GWHPBQDX009024
Cclescaffold_50138230.1	citrus_clementina	Cclescaffold_50138230.1
Cclescaffold_50138230.2	citrus_clementina	Cclescaffold_50138230.2
CIgra03G0008390.1	citrus_grandis	CIgra03G0008390.1
CIgra03G0008390.2	citrus_grandis	CIgra03G0008390.2
CIgra03G0008390.3	citrus_grandis	CIgra03G0008390.3
CIgra03G0008390.4	citrus_grandis	CIgra03G0008390.4
Cichscaffold_1920081670.1	citrus_ichangensis	Cichscaffold_1920081670.1
Cichscaffold_1920081670.2	citrus_ichangensis	Cichscaffold_1920081670.2
Cichscaffold_2980147890.1	citrus_ichangensis	Cichscaffold_2980147890.1
citrus_limon_GWHPCBFQ015033.1	citrus_limon	citrus_limon_GWHPCBFQ015033.1
citrus_limon_GWHPCBFQ018668.1	citrus_limon	citrus_limon_GWHPCBFQ018668.1
Cmedscaffold_270131540.1	citrus_medica	Cmedscaffold_270131540.1
Cmedscaffold_270131540.2	citrus_medica	Cmedscaffold_270131540.2
Cmedscaffold_270131540.3	citrus_medica	Cmedscaffold_270131540.3
Cretscaffold480_cov830092560.1	citrus_reticulata	Cretscaffold480_cov830092560.1
Cretscaffold85926_cov560189970.1	citrus_reticulata	Cretscaffold85926_cov560189970.1
Csinscaffold000930134400.1	citrus_sinensis	Csinscaffold000930134400.1
CLchi18G0000440.1	cladopus_chinensis	CLchi18G0000440.1
CLchi23G0003640.1	cladopus_chinensis	CLchi23G0003640.1
CLchi26G0001350.1	cladopus_chinensis	CLchi26G0001350.1
CsonA4G0027610.1	cleistogenes_songorica	CsonA4G0027610.1
CsonA4G0027620.1	cleistogenes_songorica	CsonA4G0027620.1
CsonB3G0005640.1	cleistogenes_songorica	CsonB3G0005640.1
CsonB4G0026030.1	cleistogenes_songorica	CsonB4G0026030.1
CsonB4G0026040.1	cleistogenes_songorica	CsonB4G0026040.1