PMK

Atlas summary family PMK.

Lineage Coverage

Detected in 734 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
Carb940630085980.1	clethra_arborea	Carb940630085980.1
Carb964340151490.1	clethra_arborea	Carb964340151490.1
Carb969780182360.1	clethra_arborea	Carb969780182360.1
Carb977080226490.1	clethra_arborea	Carb977080226490.1
CLame665380142430	climacium_americanum	CLame665380142430
Cnucscaffold13790048310	cocos_nucifera	Cnucscaffold13790048310
Cnucscaffold180920077660	cocos_nucifera	Cnucscaffold180920077660
codonopsis_lanceolata_Cl_chr02_42960T	codonopsis_lanceolata	codonopsis_lanceolata_Cl_chr02_42960T
codonopsis_lanceolata_Cl_chr05_04290T	codonopsis_lanceolata	codonopsis_lanceolata_Cl_chr05_04290T
codonopsis_lanceolata_Cl_chr07_01690T	codonopsis_lanceolata	codonopsis_lanceolata_Cl_chr07_01690T
Ccane08G0003790.1	coffea_canephora	Ccane08G0003790.1
Ccane08G0004670.1	coffea_canephora	Ccane08G0004670.1
Ccane09G0004510.1	coffea_canephora	Ccane09G0004510.1
coix_lacryma-jobi_GWHPAAYR014252	coix_lacryma_jobi	coix_lacryma-jobi_GWHPAAYR014252
coix_lacryma-jobi_GWHPAAYR014253	coix_lacryma_jobi	coix_lacryma-jobi_GWHPAAYR014253
coix_lacryma-jobi_GWHPAAYR014254	coix_lacryma_jobi	coix_lacryma-jobi_GWHPAAYR014254
coix_lacryma-jobi_GWHPAAYR014255	coix_lacryma_jobi	coix_lacryma-jobi_GWHPAAYR014255
coix_lacryma-jobi_GWHPAAYR014256	coix_lacryma_jobi	coix_lacryma-jobi_GWHPAAYR014256
colocasia_esculenta_EVM0007826.1	colocasia_esculenta	colocasia_esculenta_EVM0007826.1
colocasia_esculenta_EVM0009833.1	colocasia_esculenta	colocasia_esculenta_EVM0009833.1
Cconscaffold_60137680	conocephalum_conicum	Cconscaffold_60137680
Ccapcontig091740081540.1	corchorus_capsularis	Ccapcontig091740081540.1
COsat04G0032660.1	coriandrum_sativum	COsat04G0032660.1
COsat04G0032670.1	coriandrum_sativum	COsat04G0032670.1
COsat04G0033010.1	coriandrum_sativum	COsat04G0033010.1
coriaria_nepalensis_Conep02aG0009500.1	coriaria_nepalensis	coriaria_nepalensis_Conep02aG0009500.1
coriaria_nepalensis_Conep02bG0008900.1	coriaria_nepalensis	coriaria_nepalensis_Conep02bG0008900.1
coriaria_nepalensis_Conep08aG0051900.1	coriaria_nepalensis	coriaria_nepalensis_Conep08aG0051900.1
coriaria_nepalensis_Conep08bG0051600.1	coriaria_nepalensis	coriaria_nepalensis_Conep08bG0051600.1
coriaria_nepalensis_Conep12aG0051800.1	coriaria_nepalensis	coriaria_nepalensis_Conep12aG0051800.1