PMK

Atlas summary family PMK.

Lineage Coverage

Detected in 734 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
prunus_yedoensis_CYE_r3.1SPA5_g005480.1	prunus_yedoensis	prunus_yedoensis_CYE_r3.1SPA5_g005480.1
prunus_yedoensis_CYE_r3.1SPA7_g017540.1	prunus_yedoensis	prunus_yedoensis_CYE_r3.1SPA7_g017540.1
prunus_yedoensis_CYE_r3.1SPE0_g126470.1	prunus_yedoensis	prunus_yedoensis_CYE_r3.1SPE0_g126470.1
prunus_yedoensis_CYE_r3.1SPE5_g005690.1	prunus_yedoensis	prunus_yedoensis_CYE_r3.1SPE5_g005690.1
prunus_yedoensis_CYE_r3.1SPE7_g010960.1	prunus_yedoensis	prunus_yedoensis_CYE_r3.1SPE7_g010960.1
przewalskia_tangutica_MNPT000837.1	przewalskia_tangutica	przewalskia_tangutica_MNPT000837.1
przewalskia_tangutica_MNPT005330.1	przewalskia_tangutica	przewalskia_tangutica_MNPT005330.1
przewalskia_tangutica_MNPT017359.1	przewalskia_tangutica	przewalskia_tangutica_MNPT017359.1
przewalskia_tangutica_MNPT020926.1	przewalskia_tangutica	przewalskia_tangutica_MNPT020926.1
przewalskia_tangutica_MNPT029386.1	przewalskia_tangutica	przewalskia_tangutica_MNPT029386.1
Pcin1794780072210	pseudobryum_cinclidioides	Pcin1794780072210
psidium_guajava_evm.model.ctg26.361	psidium_guajava	psidium_guajava_evm.model.ctg26.361
psidium_guajava_evm.model.ctg30.175	psidium_guajava	psidium_guajava_evm.model.ctg30.175
PsteC9291210056720.1	pterocarya_stenoptera	PsteC9291210056720.1
Pstescaffold43160227020.1	pterocarya_stenoptera	Pstescaffold43160227020.1
Pstescaffold77940360040.1	pterocarya_stenoptera	Pstescaffold77940360040.1
Pstescaffold95140425710.1	pterocarya_stenoptera	Pstescaffold95140425710.1
Ppul5790620151470	ptilidium_pulcherrimum	Ppul5790620151470
Pwilscaffold_60200950	ptychomitrium_wilsonii	Pwilscaffold_60200950
Pcyg2511270073220	ptychomnion_cygnisetum	Pcyg2511270073220
Pten01G0016610.1	puccinellia_tenuiflora	Pten01G0016610.1
Pten01G0016810.1	puccinellia_tenuiflora	Pten01G0016810.1
pugionium_cornutum_Pco01398.t1	pugionium_cornutum	pugionium_cornutum_Pco01398.t1
pugionium_cornutum_Pco30161.t1	pugionium_cornutum	pugionium_cornutum_Pco30161.t1
pugionium_dolabratum_Pdo00023.t1	pugionium_dolabratum	pugionium_dolabratum_Pdo00023.t1
pugionium_dolabratum_Pdo25761.t1	pugionium_dolabratum	pugionium_dolabratum_Pdo25761.t1
Pspiscaffold_60118240	pyrrhobryum_spiniforme	Pspiscaffold_60118240
GWHPAAYT030532	pyrus_betuleafolia	GWHPAAYT030532
GWHPAAYT030576	pyrus_betuleafolia	GWHPAAYT030576
Pbre09G0003060	pyrus_bretschneideri	Pbre09G0003060