PMK

Atlas summary family PMK.

Lineage Coverage

Detected in 734 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
Pbre09G0003290	pyrus_bretschneideri	Pbre09G0003290
Pbre17G0002580	pyrus_bretschneideri	Pbre17G0002580
Pbre17G0004310	pyrus_bretschneideri	Pbre17G0004310
PYcom09G0012890.1	pyrus_communis	PYcom09G0012890.1
PYcom16G0008590.1	pyrus_communis	PYcom16G0008590.1
PYcom17G0019230.1	pyrus_communis	PYcom17G0019230.1
pyrus_ussuriensis_x_communis_Pdr0g005730.1	pyrus_ussuriensis_x_communis	pyrus_ussuriensis_x_communis_Pdr0g005730.1
pyrus_ussuriensis_x_communis_Pdr0g031000.1	pyrus_ussuriensis_x_communis	pyrus_ussuriensis_x_communis_Pdr0g031000.1
pyrus_ussuriensis_x_communis_Pdr0g046250.1	pyrus_ussuriensis_x_communis	pyrus_ussuriensis_x_communis_Pdr0g046250.1
pyrus_ussuriensis_x_communis_Pdr9g002840.1	pyrus_ussuriensis_x_communis	pyrus_ussuriensis_x_communis_Pdr9g002840.1
quercus_dentata_GWHPBRAD033743	quercus_dentata	quercus_dentata_GWHPBRAD033743
quercus_lobata_QL12p001817	quercus_lobata	quercus_lobata_QL12p001817
Qrob08G0007280	quercus_robur	Qrob08G0007280
Qrob12G0000170	quercus_robur	Qrob12G0000170
quercus_rubra_Qurub.12G009900.1	quercus_rubra	quercus_rubra_Qurub.12G009900.1
XP_023882929.1	quercus_suber	XP_023882929.1
XP_023885753.1	quercus_suber	XP_023885753.1
XP_023889438.1	quercus_suber	XP_023889438.1
XP_023903236.1	quercus_suber	XP_023903236.1
XP_023913649.1	quercus_suber	XP_023913649.1
XP_023916744.1	quercus_suber	XP_023916744.1
quercus_variabilis_Quercus_variabilis00002526.1	quercus_variabilis	quercus_variabilis_Quercus_variabilis00002526.1
Rnitcontig_4830144090	racomitrium_nitidulum	Rnitcontig_4830144090
RdisGWHAAKD000382450200410.1	raddia_distichophylla	RdisGWHAAKD000382450200410.1
RdisGWHAAKD000382450200420.1	raddia_distichophylla	RdisGWHAAKD000382450200420.1
Rgu003921	raddia_guianensis	Rgu003921
raphanus_raphanistrum_GWHPANWN023246	raphanus_raphanistrum	raphanus_raphanistrum_GWHPANWN023246
raphanus_raphanistrum_GWHPANWN027593	raphanus_raphanistrum	raphanus_raphanistrum_GWHPANWN027593
raphanus_raphanistrum_GWHPANWN042397	raphanus_raphanistrum	raphanus_raphanistrum_GWHPANWN042397
raphanus_raphanistrum_GWHPANWN042398	raphanus_raphanistrum	raphanus_raphanistrum_GWHPANWN042398