PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status Best Target
quercus_lobata_QL02p022601 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL02p022650 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL02p022702 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL02p022728 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL02p027166 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL02p033963 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL03p030867 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL03p030909 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL03p031025 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL03p031040 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL03p031483 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL03p031510 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL03p056901 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL04p066142 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL04p066155 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL04p066158 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL04p076636 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL05p043389 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL06p050857 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL08p001451 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL08p037919 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL08p037930 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL08p037935 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL08p037941 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL08p037979 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL08p037995 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL08p047483 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL08p047527 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL08p047627 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL09p006915 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL09p018290 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL09p018316 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL09p018354 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL09p026076 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL09p034277 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL09p034300 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL10p048972 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL10p049011 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL10p049756 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL10p049768 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL11p052670 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL11p052706 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL11p052720 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL11p052735 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL11p052746 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL11p052766 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL11p052778 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL11p052810 Alkaloid 16OMT medium borderline 16OMT__00001__sp_B0EXJ8_HTOMT_CATRO
quercus_lobata_QL05p043378 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00002__sp_D3KY99_OMT2_CARIP
quercus_lobata_QL08p037960 Alkaloid 6OMT_4OMT_SOMT low borderline 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG