PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
quercus_lobata_QL01p016147 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
quercus_lobata_QL02p042012 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
quercus_lobata_QL03p043093 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
quercus_lobata_QL05p033500 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL06p010987 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL06p011001 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL06p011020 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL06p011038 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL06p011085 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL06p011089 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL06p011093 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL06p011115 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL06p011120 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL06p011134 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL06p053550 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
quercus_lobata_QL08p018774 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
quercus_lobata_QL09p023063 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL09p023065 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL09p023071 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
quercus_lobata_QL09p023110 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
quercus_lobata_QL09p023114 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL09p023123 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
quercus_lobata_QL09p023146 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
quercus_lobata_QL09p023171 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
quercus_lobata_QL09p023188 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
quercus_lobata_QL09p029761 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
quercus_lobata_QL09p038028 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
quercus_lobata_QL09p050055 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
quercus_lobata_QL10p016576 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
quercus_lobata_QL11p040254 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
quercus_lobata_QL12p031468 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA