PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Gene Pathway Family Confidence Status
quercus_lobata_QL02p014101 Steroid ROT3/CYP90C1 medium borderline
quercus_lobata_QL02p035380 Steroid ROT3/CYP90C1 medium borderline
quercus_lobata_QL02p036628 Steroid ROT3/CYP90C1 medium borderline
quercus_lobata_QL04p025107 Steroid ROT3/CYP90C1 medium borderline
quercus_lobata_QL04p088016 Steroid ROT3/CYP90C1 low borderline
quercus_lobata_QL04p088021 Steroid ROT3/CYP90C1 low borderline
quercus_lobata_QL04p088754 Steroid ROT3/CYP90C1 low borderline
quercus_lobata_QL05p081454 Steroid ROT3/CYP90C1 medium borderline
quercus_lobata_QL05p084268 Steroid ROT3/CYP90C1 medium borderline
quercus_lobata_QL06p034805 Steroid ROT3/CYP90C1 medium borderline
quercus_lobata_QL06p035384 Steroid ROT3/CYP90C1 medium pass
quercus_lobata_QL09p003562 Steroid ROT3/CYP90C1 low borderline
quercus_lobata_QL10p007397 Steroid ROT3/CYP90C1 medium borderline
quercus_lobata_QL10p039998 Steroid ROT3/CYP90C1 medium borderline
quercus_lobata_QL11p007999 Steroid ROT3/CYP90C1 low borderline
quercus_lobata_QL12p006452 Steroid ROT3/CYP90C1 medium borderline
quercus_lobata_QL12p017437 Steroid ROT3/CYP90C1 medium borderline
quercus_lobata_QL12p036586 Steroid ROT3/CYP90C1 low borderline