PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
quercus_lobata_QL01p024519 Alkaloid GS high pass
quercus_lobata_QL01p035526 Alkaloid GS low borderline
quercus_lobata_QL02p012510 Alkaloid GS high pass
quercus_lobata_QL02p025510 Alkaloid GS low borderline
quercus_lobata_QL02p025615 Alkaloid GS low borderline
quercus_lobata_QL02p025639 Alkaloid GS low borderline
quercus_lobata_QL02p026716 Alkaloid GS low borderline
quercus_lobata_QL02p026719 Alkaloid GS medium pass
quercus_lobata_QL02p026742 Alkaloid GS high pass
quercus_lobata_QL02p026758 Alkaloid GS high pass
quercus_lobata_QL02p070750 Alkaloid GS low borderline
quercus_lobata_QL02p076556 Alkaloid GS low borderline
quercus_lobata_QL02p076612 Alkaloid GS low borderline
quercus_lobata_QL03p060248 Alkaloid GS low borderline
quercus_lobata_QL05p081676 Alkaloid GS low borderline
quercus_lobata_QL05p081681 Alkaloid GS low borderline
quercus_lobata_QL06p031096 Alkaloid GS high pass
quercus_lobata_QL06p036440 Alkaloid GS high pass
quercus_lobata_QL06p036444 Alkaloid GS high pass
quercus_lobata_QL06p036463 Alkaloid GS low borderline
quercus_lobata_QL06p036478 Alkaloid GS low borderline
quercus_lobata_QL06p036490 Alkaloid GS high pass
quercus_lobata_QL06p036534 Alkaloid GS high pass
quercus_lobata_QL06p036556 Alkaloid GS high pass
quercus_lobata_QL06p036580 Alkaloid GS high pass
quercus_lobata_QL06p036606 Alkaloid GS medium pass
quercus_lobata_QL06p036639 Alkaloid GS high pass
quercus_lobata_QL06p036685 Alkaloid GS high pass
quercus_lobata_QL06p036693 Alkaloid GS high pass
quercus_lobata_QL06p036762 Alkaloid GS medium pass
quercus_lobata_QL06p036809 Alkaloid GS high pass
quercus_lobata_QL06p037053 Alkaloid GS high pass
quercus_lobata_QL08p023388 Alkaloid GS low borderline
quercus_lobata_QL08p051821 Alkaloid GS low borderline
quercus_lobata_QL08p065276 Alkaloid GS low borderline
quercus_lobata_QL09p015404 Alkaloid GS medium pass
quercus_lobata_QL09p015409 Alkaloid GS medium pass
quercus_lobata_QL09p015423 Alkaloid GS medium pass
quercus_lobata_QL09p026276 Alkaloid GS low borderline
quercus_lobata_QL09p049534 Alkaloid GS low borderline
quercus_lobata_QL09p049556 Alkaloid GS low borderline
quercus_lobata_QL09p049578 Alkaloid GS low borderline
quercus_lobata_QL09p049612 Alkaloid GS low borderline
quercus_lobata_QL09p049648 Alkaloid GS low borderline
quercus_lobata_QL09p049697 Alkaloid GS low borderline
quercus_lobata_QL09p049778 Alkaloid GS low borderline
quercus_lobata_QL10p026277 Alkaloid GS high pass
quercus_lobata_QL10p038869 Alkaloid GS medium pass
quercus_lobata_QL10p038963 Alkaloid GS medium pass
quercus_lobata_QL11p033622 Alkaloid GS high pass