PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
quercus_lobata_QL01p010523 Alkaloid T16H medium borderline
quercus_lobata_QL01p010530 Alkaloid T16H medium borderline
quercus_lobata_QL01p010966 Alkaloid T16H medium borderline
quercus_lobata_QL01p024463 Alkaloid T16H medium borderline
quercus_lobata_QL02p006605 Alkaloid T16H medium borderline
quercus_lobata_QL02p006882 Alkaloid T16H low borderline
quercus_lobata_QL02p037368 Alkaloid T16H medium borderline
quercus_lobata_QL03p002835 Alkaloid T16H medium borderline
quercus_lobata_QL03p003603 Alkaloid T16H medium borderline
quercus_lobata_QL03p056647 Alkaloid T16H medium borderline
quercus_lobata_QL03p056673 Alkaloid T16H medium borderline
quercus_lobata_QL03p056739 Alkaloid T16H medium borderline
quercus_lobata_QL03p056805 Alkaloid T16H medium borderline
quercus_lobata_QL03p057389 Alkaloid T16H medium borderline
quercus_lobata_QL03p057398 Alkaloid T16H medium borderline
quercus_lobata_QL03p060394 Alkaloid T16H medium borderline
quercus_lobata_QL03p068433 Alkaloid T16H low borderline
quercus_lobata_QL04p004931 Alkaloid T16H medium borderline
quercus_lobata_QL04p004995 Alkaloid T16H low borderline
quercus_lobata_QL04p005020 Alkaloid T16H low borderline
quercus_lobata_QL04p005070 Alkaloid T16H medium borderline
quercus_lobata_QL04p005106 Alkaloid T16H medium borderline
quercus_lobata_QL04p024505 Alkaloid T16H low borderline
quercus_lobata_QL04p060504 Alkaloid T16H medium borderline
quercus_lobata_QL04p067413 Alkaloid T16H medium borderline
quercus_lobata_QL05p019387 Alkaloid T16H medium borderline
quercus_lobata_QL05p052952 Alkaloid T16H low borderline
quercus_lobata_QL05p065028 Alkaloid T16H medium borderline
quercus_lobata_QL05p071789 Alkaloid T16H medium borderline
quercus_lobata_QL05p085702 Alkaloid T16H medium borderline
quercus_lobata_QL05p085817 Alkaloid T16H medium borderline
quercus_lobata_QL06p044004 Alkaloid T16H low borderline
quercus_lobata_QL07p000400 Alkaloid T16H low borderline
quercus_lobata_QL07p014829 Alkaloid T16H medium pass
quercus_lobata_QL08p004965 Alkaloid T16H medium borderline
quercus_lobata_QL08p016784 Alkaloid T16H medium borderline
quercus_lobata_QL08p061872 Alkaloid T16H medium borderline
quercus_lobata_QL09p046619 Alkaloid T16H medium borderline
quercus_lobata_QL09p050331 Alkaloid T16H medium borderline
quercus_lobata_QL10p006243 Alkaloid T16H medium borderline
quercus_lobata_QL10p006337 Alkaloid T16H medium pass
quercus_lobata_QL10p006422 Alkaloid T16H medium borderline
quercus_lobata_QL10p006449 Alkaloid T16H medium borderline
quercus_lobata_QL10p006495 Alkaloid T16H medium borderline
quercus_lobata_QL10p006543 Alkaloid T16H medium borderline
quercus_lobata_QL10p008289 Alkaloid T16H low borderline
quercus_lobata_QL10p008346 Alkaloid T16H medium borderline
quercus_lobata_QL10p024448 Alkaloid T16H medium borderline
quercus_lobata_QL10p034494 Alkaloid T16H medium borderline
quercus_lobata_QL11p000936 Alkaloid T16H medium borderline