PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
quercus_lobata_QL01p025685 Alkaloid PMT low borderline
quercus_lobata_QL02p000171 Alkaloid PMT medium pass
quercus_lobata_QL02p009521 Alkaloid PMT low borderline
quercus_lobata_QL02p070758 Alkaloid PMT low borderline
quercus_lobata_QL03p055550 Alkaloid PMT low borderline
quercus_lobata_QL03p055719 Alkaloid PMT low borderline
quercus_lobata_QL03p061719 Alkaloid PMT medium borderline
quercus_lobata_QL05p036676 Alkaloid PMT low borderline
quercus_lobata_QL05p067554 Alkaloid PMT low borderline
quercus_lobata_QL05p067607 Alkaloid PMT low borderline
quercus_lobata_QL06p002973 Alkaloid PMT medium pass
quercus_lobata_QL06p008636 Alkaloid PMT medium pass
quercus_lobata_QL08p063492 Alkaloid PMT low borderline
quercus_lobata_QL09p005806 Alkaloid PMT medium pass
quercus_lobata_QL09p005835 Alkaloid PMT medium pass
quercus_lobata_QL09p005864 Alkaloid PMT medium pass
quercus_lobata_QL09p005874 Alkaloid PMT low borderline
quercus_lobata_QL09p005880 Alkaloid PMT medium pass
quercus_lobata_QL09p010247 Alkaloid PMT medium borderline
quercus_lobata_QL09p019980 Alkaloid PMT medium pass
quercus_lobata_QL09p020065 Alkaloid PMT medium pass
quercus_lobata_QL10p002057 Alkaloid PMT low borderline
quercus_lobata_QL10p012202 Alkaloid PMT medium borderline
quercus_lobata_QL11p004882 Alkaloid PMT low borderline
quercus_lobata_QL11p005770 Alkaloid PMT low borderline
quercus_lobata_QL11p006505 Alkaloid PMT low borderline
quercus_lobata_QL12p002953 Alkaloid PMT medium pass
quercus_lobata_QL12p002988 Alkaloid PMT medium pass
quercus_lobata_QL12p003279 Alkaloid PMT medium pass
quercus_lobata_QL12p009381 Alkaloid PMT low borderline
quercus_lobata_QL12p009385 Alkaloid PMT low borderline
quercus_lobata_QL12p009454 Alkaloid PMT low borderline
quercus_lobata_QL12p009487 Alkaloid PMT low borderline
quercus_lobata_QL12p034578 Alkaloid PMT medium pass