Quercus lobata (quercus_lobata)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 28.49% Alkaloid pathway 24.35% Phenylpropanoid pathway 18.45% Flavonoid pathway 13.56% Rosmarinic acid pathway 8.11% Steroid pathway 7.04%

Family Distribution

2899 Candidate Genes

C4H 6.51% C3'H/CYP98A 6.09% UGT 5.47% 7DLGT 4.83% UFGT 4.63% BAHD 4.56% CYP76 4.14% IFS 3.88%

Other Families 59.89%

More Families (97)

T3O 255 3.79% POD 216 3.21% DWF4/CYP90B1 194 2.88% F3H 171 2.54% 4CL 162 2.41% CAD 142 2.11% F3'H/CYP75B 138 2.05% CAS 132 1.96% BR6OX2/CYP85A2 118 1.75% TRI/TRII 116 1.72% CODM/T6ODM 104 1.54% STR 96 1.43% H6H 96 1.43% NMT 87 1.29% TPS 87 1.29% SGD 84 1.25% SMT1/SMT2/SMT3 82 1.22% LAC 81 1.2% GES 80 1.19% CYP71 80 1.19% COMT 73 1.08% GS 60 0.89% T16H 58 0.86% G8O/G8H 58 0.86% HCT 56 0.83% FNS 54 0.8% CYP90D1 54 0.8% IFR 51 0.76% 16OMT 48 0.71% IO 47 0.7% TAT 47 0.7% F3'5'H/CYP75A 40 0.59% 7DLH 39 0.58% PYKS 37 0.55% CSE 37 0.55% F5H/CYP84A 37 0.55% RAS 35 0.52% BR6OX1/CYP85A1 35 0.52% LAMT 34 0.51% PMT 34 0.51% BBE 32 0.48% NCS 31 0.46% 8HGO 30 0.45% SLS 29 0.43% ANR 29 0.43% CPD/CYP90A1 27 0.4% CCR 22 0.33% ISY 21 0.31% PAL 21 0.31% DFR 20 0.3% CYP51G1 19 0.28% TYDC_DDC 18 0.27% ROT3/CYP90C1 18 0.27% ANS/LDOX 17 0.25% CCoAOMT 16 0.24% MPO 15 0.22% HPPR 15 0.22% CNMT 14 0.21% COR 14 0.21% GGPPS 12 0.18% FPPS 12 0.18% CYP719 11 0.16% CYP80F1 10 0.15% SQS/FDFT1 10 0.15% CHS 9 0.13% HDR/IspH 9 0.13% DXS 7 0.1% CYP80B1 6 0.09% 6OMT_4OMT_SOMT 6 0.09% MVK 6 0.09% DWF7 5 0.07% SQE 5 0.07% AACT 5 0.07% CPR 4 0.06% CPI1 4 0.06% DET2 4 0.06% MVD 4 0.06% DXR 4 0.06% FLS 3 0.04% HMGR 3 0.04% MCT/IspD 3 0.04% ODC 2 0.03% TDC 2 0.03% XMT_MXMT_DXMT 2 0.03% CHI 2 0.03% SMO1/SMO2 2 0.03% DWF5 2 0.03% FK 2 0.03% CMK/IspE 2 0.03% MDS/IspF 2 0.03% HMGS 2 0.03% IDI 2 0.03% ADC 1 0.01% DWF1 1 0.01% HYD1 1 0.01% HDS/IspG 1 0.01% PMK 1 0.01%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	826	19	UGT (341)	View species results
Alkaloid pathway	706	25	7DLGT (169)	View species results
Phenylpropanoid pathway	535	12	POD (200)	View species results
Flavonoid pathway	393	10	UFGT (289)	View species results
Rosmarinic acid pathway	235	7	C4H (110)	View species results
Steroid pathway	204	14	CAS (120)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	2661	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	398	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: NMT

Gene	Pathway	Family	Confidence	Status	Best Target
quercus_lobata_QL01p000726	Alkaloid	NMT	medium	borderline	NMT__00066__sp_Q9SU94_ANM11_ARATH
quercus_lobata_QL01p000777	Alkaloid	NMT	low	borderline	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
quercus_lobata_QL01p015549	Alkaloid	NMT	low	borderline	NMT__00016__sp_F4JNX3_CMKMT_ARATH
quercus_lobata_QL02p009288	Alkaloid	NMT	medium	borderline	NMT__00043__sp_Q8H0D2_DXMT1_COFAR
quercus_lobata_QL02p012967	Alkaloid	NMT	medium	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
quercus_lobata_QL02p016503	Alkaloid	NMT	medium	pass	NMT__00017__sp_F4K1J4_ATXR7_ARATH
quercus_lobata_QL02p020481	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ
quercus_lobata_QL02p024705	Alkaloid	NMT	medium	pass	NMT__00020__sp_O23372_ATXR3_ARATH
quercus_lobata_QL02p033920	Alkaloid	NMT	medium	borderline	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
quercus_lobata_QL02p038471	Alkaloid	NMT	medium	pass	NMT__00040__sp_Q84WW6_ASHH1_ARATH
quercus_lobata_QL02p063169	Alkaloid	NMT	medium	pass	NMT__00066__sp_Q9SU94_ANM11_ARATH
quercus_lobata_QL02p069506	Alkaloid	NMT	low	borderline	NMT__00042__sp_Q8GZB6_SUVH4_ARATH
quercus_lobata_QL02p069517	Alkaloid	NMT	medium	pass	NMT__00042__sp_Q8GZB6_SUVH4_ARATH
quercus_lobata_QL02p087443	Alkaloid	NMT	medium	pass	NMT__00060__sp_Q9MAT5_ANM10_ARATH
quercus_lobata_QL02p093066	Alkaloid	NMT	medium	pass	NMT__00054__sp_Q9FF80_SUVH1_ARATH
quercus_lobata_QL02p094348	Alkaloid	NMT	low	borderline	NMT__00040__sp_Q84WW6_ASHH1_ARATH
quercus_lobata_QL03p029707	Alkaloid	NMT	low	borderline	NMT__00048__sp_Q8W595_SUVR4_ARATH
quercus_lobata_QL03p049447	Alkaloid	NMT	medium	pass	NMT__00042__sp_Q8GZB6_SUVH4_ARATH
quercus_lobata_QL03p050850	Alkaloid	NMT	low	borderline	NMT__00041__sp_Q8GWT4_ANM15_ARATH
quercus_lobata_QL03p054439	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
quercus_lobata_QL03p054462	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
quercus_lobata_QL03p069503	Alkaloid	NMT	medium	pass	NMT__00068__sp_Q9XI84_RBCMT_ARATH
quercus_lobata_QL04p008841	Alkaloid	NMT	medium	borderline	NMT__00059__sp_Q9M571_PEAMT_SPIOL
quercus_lobata_QL04p019592	Alkaloid	NMT	medium	pass	NMT__00023__sp_O82210_ANM12_ARATH
quercus_lobata_QL04p022962	Alkaloid	NMT	medium	pass	NMT__00054__sp_Q9FF80_SUVH1_ARATH
quercus_lobata_QL04p061125	Alkaloid	NMT	low	borderline	NMT__00024__sp_P0CB22_ATX2_ARATH
quercus_lobata_QL04p077387	Alkaloid	NMT	medium	pass	NMT__00020__sp_O23372_ATXR3_ARATH
quercus_lobata_QL05p036089	Alkaloid	NMT	medium	pass	NMT__00061__sp_Q9SAH5_PLMT_ARATH
quercus_lobata_QL05p041452	Alkaloid	NMT	medium	borderline	NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
quercus_lobata_QL05p064527	Alkaloid	NMT	low	borderline	NMT__00045__sp_Q8VYX1_PEAM1_WHEAT
quercus_lobata_QL06p008928	Alkaloid	NMT	medium	pass	NMT__00039__sp_Q84W92_ANM13_ARATH
quercus_lobata_QL06p020190	Alkaloid	NMT	medium	borderline	NMT__00070__sp_W5U2K2_NMT_CATRO
quercus_lobata_QL06p020667	Alkaloid	NMT	medium	borderline	NMT__00070__sp_W5U2K2_NMT_CATRO
quercus_lobata_QL06p020826	Alkaloid	NMT	low	borderline	NMT__00048__sp_Q8W595_SUVR4_ARATH
quercus_lobata_QL06p021633	Alkaloid	NMT	medium	pass	NMT__00067__sp_Q9T0G7_SUVH9_ARATH
quercus_lobata_QL06p029526	Alkaloid	NMT	medium	pass	NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
quercus_lobata_QL06p035528	Alkaloid	NMT	medium	borderline	NMT__00043__sp_Q8H0D2_DXMT1_COFAR
quercus_lobata_QL06p035586	Alkaloid	NMT	medium	borderline	NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB
quercus_lobata_QL06p038894	Alkaloid	NMT	medium	pass	NMT__00046__sp_Q8VZ17_SUVH6_ARATH
quercus_lobata_QL06p040854	Alkaloid	NMT	medium	pass	NMT__00025__sp_P93831_CLF_ARATH
quercus_lobata_QL06p044462	Alkaloid	NMT	medium	pass	NMT__00021__sp_O64827_SUVR5_ARATH
quercus_lobata_QL06p050655	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
quercus_lobata_QL06p050760	Alkaloid	NMT	medium	pass	NMT__00016__sp_F4JNX3_CMKMT_ARATH
quercus_lobata_QL07p000219	Alkaloid	NMT	medium	borderline	NMT__00053__sp_Q9C6B9_PEAM3_ARATH
quercus_lobata_QL07p014602	Alkaloid	NMT	medium	pass	NMT__00049__sp_Q93YF5_SUVH1_TOBAC
quercus_lobata_QL07p041500	Alkaloid	NMT	medium	borderline	NMT__00018__sp_I1M2U5_NAMT1_SOYBN
quercus_lobata_QL07p041511	Alkaloid	NMT	medium	pass	NMT__00062__sp_Q9SCP7_NAMT1_ARATH
quercus_lobata_QL07p041523	Alkaloid	NMT	medium	borderline	NMT__00062__sp_Q9SCP7_NAMT1_ARATH
quercus_lobata_QL08p007634	Alkaloid	NMT	low	borderline	NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
quercus_lobata_QL08p025144	Alkaloid	NMT	low	borderline	NMT__00035__sp_Q6K431_TRX1_ORYSJ