PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status Best Target
quercus_lobata_QL01p025685 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL01p051268 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL02p009521 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL02p070758 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL03p028550 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL03p028553 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL03p028626 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL03p028750 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL03p028770 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL03p038558 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL03p053581 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL03p055412 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL03p055464 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL03p055550 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL03p055719 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL05p036676 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL05p051033 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL05p051430 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL05p055294 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL05p055355 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL05p067554 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL05p067607 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL06p008636 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL06p026179 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL06p041429 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL07p012097 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL08p062688 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL08p063492 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL09p005782 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL09p005806 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL09p005835 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL09p005864 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL09p005874 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL09p005880 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL09p019980 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL09p020003 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL09p020032 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL09p020039 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL09p020065 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL09p020261 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL09p052145 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL10p002057 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL10p004952 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL10p049088 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL10p049147 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL11p004882 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL11p004893 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
quercus_lobata_QL11p005770 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL11p006505 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
quercus_lobata_QL12p002953 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC