PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
quercus_lobata_QL02p025371 Alkaloid BBE medium borderline
quercus_lobata_QL02p098633 Alkaloid BBE medium borderline
quercus_lobata_QL02p098636 Alkaloid BBE medium borderline
quercus_lobata_QL04p000050 Alkaloid BBE medium borderline
quercus_lobata_QL04p003169 Alkaloid BBE medium borderline
quercus_lobata_QL05p053194 Alkaloid BBE medium borderline
quercus_lobata_QL05p063156 Alkaloid BBE medium borderline
quercus_lobata_QL05p063499 Alkaloid BBE medium borderline
quercus_lobata_QL05p063837 Alkaloid BBE medium borderline
quercus_lobata_QL05p063925 Alkaloid BBE medium borderline
quercus_lobata_QL05p063933 Alkaloid BBE medium borderline
quercus_lobata_QL05p063957 Alkaloid BBE medium borderline
quercus_lobata_QL05p064011 Alkaloid BBE medium borderline
quercus_lobata_QL05p064020 Alkaloid BBE medium borderline
quercus_lobata_QL05p064046 Alkaloid BBE medium borderline
quercus_lobata_QL05p064084 Alkaloid BBE medium borderline
quercus_lobata_QL05p064103 Alkaloid BBE medium borderline
quercus_lobata_QL05p064150 Alkaloid BBE medium borderline
quercus_lobata_QL05p064268 Alkaloid BBE medium borderline
quercus_lobata_QL05p064288 Alkaloid BBE medium borderline
quercus_lobata_QL05p064328 Alkaloid BBE medium borderline
quercus_lobata_QL05p064350 Alkaloid BBE medium borderline
quercus_lobata_QL05p064423 Alkaloid BBE medium borderline
quercus_lobata_QL05p064435 Alkaloid BBE medium borderline
quercus_lobata_QL05p064454 Alkaloid BBE medium borderline
quercus_lobata_QL05p064465 Alkaloid BBE medium borderline
quercus_lobata_QL06p008461 Alkaloid BBE low borderline
quercus_lobata_QL08p047107 Alkaloid BBE medium borderline
quercus_lobata_QL09p023755 Alkaloid BBE medium borderline
quercus_lobata_QL10p043779 Alkaloid BBE medium borderline
quercus_lobata_QL11p017829 Alkaloid BBE medium borderline
quercus_lobata_QL11p039609 Alkaloid BBE low borderline