PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
quercus_lobata_QL02p061264 Flavonoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
quercus_lobata_QL02p061377 Flavonoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
quercus_lobata_QL07p044148 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL07p044165 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL08p055354 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL93p2013_0042 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL93p2013_0048 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL02p061264 Phenylpropanoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
quercus_lobata_QL02p061377 Phenylpropanoid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
quercus_lobata_QL07p044148 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL07p044165 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL08p055354 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL93p2013_0042 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL93p2013_0048 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL02p061264 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
quercus_lobata_QL02p061377 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
quercus_lobata_QL07p044148 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL07p044165 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL08p055354 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL93p2013_0042 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
quercus_lobata_QL93p2013_0048 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR