PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DFR
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Gene Pathway Family Confidence Status Best Target
quercus_lobata_QL01p039867 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL01p043121 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL02p015765 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL02p015771 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL02p015800 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL02p015807 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL02p094670 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL02p094675 Flavonoid DFR low borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL03p003288 Flavonoid DFR medium borderline DFR__00002__sp_Q84KP0_DFRA_PYRCO
quercus_lobata_QL03p020057 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL03p025783 Flavonoid DFR low borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL03p048794 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL04p008953 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL04p009492 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL04p034468 Flavonoid DFR medium borderline DFR__00002__sp_Q84KP0_DFRA_PYRCO
quercus_lobata_QL09p000919 Flavonoid DFR medium borderline DFR__00002__sp_Q84KP0_DFRA_PYRCO
quercus_lobata_QL09p022949 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL11p028036 Flavonoid DFR medium borderline DFR__00002__sp_Q84KP0_DFRA_PYRCO
quercus_lobata_QL12p000622 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
quercus_lobata_QL12p004806 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH