PlantSME Plant secondary metabolism enzyme database

Quercus lobata (quercus_lobata)

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Imported from atlas release summary for Quercus lobata.

2899
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 826 19 UGT (341) View species results
Alkaloid pathway 706 25 7DLGT (169) View species results
Phenylpropanoid pathway 535 12 POD (200) View species results
Flavonoid pathway 393 10 UFGT (289) View species results
Rosmarinic acid pathway 235 7 C4H (110) View species results
Steroid pathway 204 14 CAS (120) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2661 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 398 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
quercus_lobata_QL01p017764 Flavonoid IFR low borderline
quercus_lobata_QL01p046195 Flavonoid IFR high pass
quercus_lobata_QL02p005347 Flavonoid IFR medium borderline
quercus_lobata_QL02p009037 Flavonoid IFR high pass
quercus_lobata_QL02p009054 Flavonoid IFR high pass
quercus_lobata_QL02p009064 Flavonoid IFR high pass
quercus_lobata_QL02p017682 Flavonoid IFR low borderline
quercus_lobata_QL02p023692 Flavonoid IFR high pass
quercus_lobata_QL02p023696 Flavonoid IFR low borderline
quercus_lobata_QL02p023706 Flavonoid IFR high pass
quercus_lobata_QL03p017109 Flavonoid IFR low borderline
quercus_lobata_QL03p017392 Flavonoid IFR low borderline
quercus_lobata_QL05p049965 Flavonoid IFR low borderline
quercus_lobata_QL05p058950 Flavonoid IFR low borderline
quercus_lobata_QL05p085123 Flavonoid IFR low borderline
quercus_lobata_QL06p007513 Flavonoid IFR low borderline
quercus_lobata_QL06p009642 Flavonoid IFR low borderline
quercus_lobata_QL06p046680 Flavonoid IFR high pass
quercus_lobata_QL06p046772 Flavonoid IFR high pass
quercus_lobata_QL06p046794 Flavonoid IFR high pass
quercus_lobata_QL06p046827 Flavonoid IFR high pass
quercus_lobata_QL06p046832 Flavonoid IFR medium pass
quercus_lobata_QL06p046857 Flavonoid IFR high pass
quercus_lobata_QL06p046870 Flavonoid IFR medium pass
quercus_lobata_QL06p046909 Flavonoid IFR high pass
quercus_lobata_QL06p046929 Flavonoid IFR high pass
quercus_lobata_QL06p046946 Flavonoid IFR high pass
quercus_lobata_QL07p046562 Flavonoid IFR low borderline
quercus_lobata_QL07p048679 Flavonoid IFR low borderline
quercus_lobata_QL08p061499 Flavonoid IFR low borderline
quercus_lobata_QL09p041638 Flavonoid IFR low borderline
quercus_lobata_QL09p046116 Flavonoid IFR high pass
quercus_lobata_QL10p022656 Flavonoid IFR high pass
quercus_lobata_QL10p022679 Flavonoid IFR high pass
quercus_lobata_QL10p039855 Flavonoid IFR high pass
quercus_lobata_QL11p040109 Flavonoid IFR low borderline
quercus_lobata_QL11p044559 Flavonoid IFR high pass
quercus_lobata_QL11p044580 Flavonoid IFR high pass
quercus_lobata_QL11p044589 Flavonoid IFR high pass
quercus_lobata_QL11p044595 Flavonoid IFR high pass
quercus_lobata_QL11p054672 Flavonoid IFR medium pass
quercus_lobata_QL11p054687 Flavonoid IFR medium pass
quercus_lobata_QL12p000516 Flavonoid IFR high pass
quercus_lobata_QL12p000525 Flavonoid IFR high pass
quercus_lobata_QL12p000574 Flavonoid IFR high pass
quercus_lobata_QL12p000599 Flavonoid IFR high pass
quercus_lobata_QL12p000635 Flavonoid IFR high pass
quercus_lobata_QL12p000710 Flavonoid IFR high pass
quercus_lobata_QL12p000728 Flavonoid IFR medium pass
quercus_lobata_QL12p001640 Flavonoid IFR low borderline