PMK

Atlas summary family PMK.

Lineage Coverage

Detected in 734 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 1501 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
raphanus_raphanistrum_GWHPANWN042399	raphanus_raphanistrum	raphanus_raphanistrum_GWHPANWN042399
Rsat08G0009790	raphanus_sativus	Rsat08G0009790
rheum_tanguticum_RtaG0031737.1	rheum_tanguticum	rheum_tanguticum_RtaG0031737.1
rheum_tanguticum_RtaG0039133.1	rheum_tanguticum	rheum_tanguticum_RtaG0039133.1
rhizophora_apiculata_RA_11295	rhizophora_apiculata	rhizophora_apiculata_RA_11295
rhizophora_apiculata_RA_19794	rhizophora_apiculata	rhizophora_apiculata_RA_19794
Rcrescaffold1391900147500	rhodiola_crenulata	Rcrescaffold1391900147500
Rcrescaffold1391900147510	rhodiola_crenulata	Rcrescaffold1391900147510
Rcrescaffold64580285510	rhodiola_crenulata	Rcrescaffold64580285510
Rdelscaffold2460088100	rhododendron_delavayi	Rdelscaffold2460088100
Rdelscaffold2877640191520	rhododendron_delavayi	Rdelscaffold2877640191520
KAG5540244.1_rhododendron_griersonianum	rhododendron_griersonianum	KAG5540244.1_rhododendron_griersonianum
KAG5540245.1_rhododendron_griersonianum	rhododendron_griersonianum	KAG5540245.1_rhododendron_griersonianum
KAG5540246.1_rhododendron_griersonianum	rhododendron_griersonianum	KAG5540246.1_rhododendron_griersonianum
KAG5558254.1_rhododendron_griersonianum	rhododendron_griersonianum	KAG5558254.1_rhododendron_griersonianum
rhododendron_molle_KAI8530633.1	rhododendron_molle	rhododendron_molle_KAI8530633.1
rhododendron_molle_KAI8530634.1	rhododendron_molle	rhododendron_molle_KAI8530634.1
rhododendron_molle_KAI8546979.1	rhododendron_molle	rhododendron_molle_KAI8546979.1
rhododendron_molle_KAI8564478.1	rhododendron_molle	rhododendron_molle_KAI8564478.1
Rova02G0022640	rhododendron_ovatum	Rova02G0022640
Rova02G0022690	rhododendron_ovatum	Rova02G0022690
Rova05G0018940	rhododendron_ovatum	Rova05G0018940
Rova13G0023500	rhododendron_ovatum	Rova13G0023500
Rova13G0023620	rhododendron_ovatum	Rova13G0023620
rhododendron_vialii_GWHPCAXW014678	rhododendron_vialii	rhododendron_vialii_GWHPCAXW014678
rhododendron_vialii_GWHPCAXW014679	rhododendron_vialii	rhododendron_vialii_GWHPCAXW014679
rhododendron_vialii_GWHPCAXW017942	rhododendron_vialii	rhododendron_vialii_GWHPCAXW017942
rhododendron_vialii_GWHPCAXW039890	rhododendron_vialii	rhododendron_vialii_GWHPCAXW039890
rhododendron_vialii_GWHPCAXW043164	rhododendron_vialii	rhododendron_vialii_GWHPCAXW043164
rhododendron_vialii_GWHPCAXW043165	rhododendron_vialii	rhododendron_vialii_GWHPCAXW043165