PlantSME Plant secondary metabolism enzyme database

Rhodiola crenulata (rhodiola_crenulata)

Imported from atlas release summary for Rhodiola crenulata.

1104
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 310 20 BAHD (138) View species results
Phenylpropanoid pathway 275 11 POD (128) View species results
Alkaloid pathway 201 19 NMT (36) View species results
Flavonoid pathway 137 11 UFGT (69) View species results
Rosmarinic acid pathway 95 7 C4H (36) View species results
Steroid pathway 86 10 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1052 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 210 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Rcrescaffold1394090161040 Alkaloid 16OMT medium borderline
Rcrescaffold1394700166300 Alkaloid 16OMT medium borderline
Rcrescaffold180750192270 Alkaloid 16OMT medium borderline
Rcrescaffold222410209150 Alkaloid 16OMT medium borderline
Rcrescaffold222410209190 Alkaloid 16OMT medium borderline
Rcrescaffold222410209200 Alkaloid 16OMT medium borderline
Rcrescaffold224600210120 Alkaloid 16OMT medium borderline
Rcrescaffold711220293800 Alkaloid 16OMT medium borderline
Rcrescaffold103730002980 Alkaloid 7DLGT medium pass
Rcrescaffold126160015860 Alkaloid 7DLGT low borderline
Rcrescaffold127490017800 Alkaloid 7DLGT medium pass
Rcrescaffold127490017810 Alkaloid 7DLGT medium pass
Rcrescaffold1284300019050 Alkaloid 7DLGT low borderline
Rcrescaffold1284300019070 Alkaloid 7DLGT low borderline
Rcrescaffold131420024580 Alkaloid 7DLGT low borderline
Rcrescaffold1327640026210 Alkaloid 7DLGT low borderline
Rcrescaffold1353160033430 Alkaloid 7DLGT low borderline
Rcrescaffold1371700043790 Alkaloid 7DLGT low borderline
Rcrescaffold1372220043910 Alkaloid 7DLGT low borderline
Rcrescaffold1372220044000 Alkaloid 7DLGT low borderline
Rcrescaffold1372960044880 Alkaloid 7DLGT low borderline
Rcrescaffold1379520049030 Alkaloid 7DLGT low borderline
Rcrescaffold1383510059140 Alkaloid 7DLGT medium pass
Rcrescaffold1384440066790 Alkaloid 7DLGT medium pass
Rcrescaffold1384490067380 Alkaloid 7DLGT high pass
Rcrescaffold1384490067410 Alkaloid 7DLGT high pass
Rcrescaffold1384550068050 Alkaloid 7DLGT low borderline
Rcrescaffold1384550068060 Alkaloid 7DLGT low borderline
Rcrescaffold1384550068160 Alkaloid 7DLGT high pass
Rcrescaffold1385260081060 Alkaloid 7DLGT low borderline
Rcrescaffold1386730096580 Alkaloid 7DLGT low borderline
Rcrescaffold1387130099700 Alkaloid 7DLGT medium pass
Rcrescaffold1387130099710 Alkaloid 7DLGT low borderline
Rcrescaffold1387130099890 Alkaloid 7DLGT low borderline
Rcrescaffold1387130099900 Alkaloid 7DLGT low borderline
Rcrescaffold1387400103630 Alkaloid 7DLGT medium pass
Rcrescaffold1388000107620 Alkaloid 7DLGT low borderline
Rcrescaffold1388900113270 Alkaloid 7DLGT low borderline
Rcrescaffold1389130115220 Alkaloid 7DLGT high pass
Rcrescaffold1389780116840 Alkaloid 7DLGT high pass
Rcrescaffold1390310123910 Alkaloid 7DLGT medium pass
Rcrescaffold1390950131910 Alkaloid 7DLGT low borderline
Rcrescaffold1391350137310 Alkaloid 7DLGT medium pass
Rcrescaffold1391560142300 Alkaloid 7DLGT high pass
Rcrescaffold1391560142650 Alkaloid 7DLGT low borderline
Rcrescaffold1391850146730 Alkaloid 7DLGT low borderline
Rcrescaffold1392200149690 Alkaloid 7DLGT medium pass
Rcrescaffold1393580155940 Alkaloid 7DLGT low borderline
Rcrescaffold1394560164570 Alkaloid 7DLGT low borderline
Rcrescaffold141230175610 Alkaloid 7DLGT low borderline